Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 KRT87P-202ENST00000534226 1464 ntBASIC19.77■□□□□ 0.76
C9orf40Q8IXQ3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf40Q8IXQ3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
C9orf40Q8IXQ3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
C9orf40Q8IXQ3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
C9orf40Q8IXQ3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 AP004607.4-201ENST00000530158 1459 ntBASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
C9orf40Q8IXQ3 AC003102.1-202ENST00000563394 1796 ntBASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 C11orf96-202ENST00000528572 1834 ntBASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C9orf40Q8IXQ3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 AC010542.4-201ENST00000563151 1910 ntBASIC19.74■□□□□ 0.75
C9orf40Q8IXQ3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C9orf40Q8IXQ3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C9orf40Q8IXQ3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C9orf40Q8IXQ3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.7■□□□□ 0.74
C9orf40Q8IXQ3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms