Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 BX664725.1-201ENST00000438252 379 ntBASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 Z92544.1-202ENST00000571933 1220 ntBASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 AL499627.2-201ENST00000606283 725 ntBASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM42Q8IWZ5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM42Q8IWZ5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 KRT125P-201ENST00000546827 989 ntBASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 AC021242.3-201ENST00000607598 1377 ntBASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 OR7E47P-201ENST00000546390 1422 ntBASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TRIM42Q8IWZ5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM42Q8IWZ5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 GUSBP5-201ENST00000418136 578 ntBASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 AL031602.1-201ENST00000633169 911 ntBASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM42Q8IWZ5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM42Q8IWZ5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM42Q8IWZ5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM42Q8IWZ5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM42Q8IWZ5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms