Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB43Q86YS6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB43Q86YS6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB43Q86YS6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RAB43Q86YS6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB43Q86YS6 ID1-201ENST00000376105 1233 ntBASIC20.29■□□□□ 0.84
RAB43Q86YS6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB43Q86YS6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB43Q86YS6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB43Q86YS6 DUSP8P3-201ENST00000399571 1760 ntBASIC20.29■□□□□ 0.84
RAB43Q86YS6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB43Q86YS6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB43Q86YS6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB43Q86YS6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB43Q86YS6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB43Q86YS6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB43Q86YS6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB43Q86YS6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.28■□□□□ 0.84
RAB43Q86YS6 AC127496.7-201ENST00000625110 1798 ntBASIC20.28■□□□□ 0.84
RAB43Q86YS6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB43Q86YS6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB43Q86YS6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB43Q86YS6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB43Q86YS6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB43Q86YS6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB43Q86YS6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB43Q86YS6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 BID-214ENST00000617586 542 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB43Q86YS6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB43Q86YS6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB43Q86YS6 ANOS2P-203ENST00000472227 1816 ntBASIC20.27■□□□□ 0.84
RAB43Q86YS6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.27■□□□□ 0.83
RAB43Q86YS6 AC009237.3-201ENST00000393279 1427 ntBASIC20.27■□□□□ 0.83
RAB43Q86YS6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RAB43Q86YS6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB43Q86YS6 AC007375.3-201ENST00000600936 2314 ntBASIC20.26■□□□□ 0.83
RAB43Q86YS6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB43Q86YS6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.26■□□□□ 0.83
RAB43Q86YS6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.26■□□□□ 0.83
RAB43Q86YS6 KRT18P11-201ENST00000435214 1283 ntBASIC20.26■□□□□ 0.83
RAB43Q86YS6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.26■□□□□ 0.83
RAB43Q86YS6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.26■□□□□ 0.83
RAB43Q86YS6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB43Q86YS6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RAB43Q86YS6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB43Q86YS6 LINC00526-201ENST00000581067 1875 ntBASIC20.26■□□□□ 0.83
RAB43Q86YS6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB43Q86YS6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB43Q86YS6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 AC092068.2-201ENST00000590491 1708 ntBASIC20.25■□□□□ 0.83
RAB43Q86YS6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB43Q86YS6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB43Q86YS6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB43Q86YS6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB43Q86YS6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB43Q86YS6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB43Q86YS6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB43Q86YS6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB43Q86YS6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB43Q86YS6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB43Q86YS6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB43Q86YS6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.24■□□□□ 0.83
RAB43Q86YS6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB43Q86YS6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB43Q86YS6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB43Q86YS6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB43Q86YS6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB43Q86YS6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms