Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC25Q86WR0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 AC104564.3-201ENST00000582367 638 ntBASIC21.94■■□□□ 1.1
CCDC25Q86WR0 OR7E47P-201ENST00000546390 1422 ntBASIC21.94■■□□□ 1.1
CCDC25Q86WR0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC25Q86WR0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 Z92544.1-202ENST00000571933 1220 ntBASIC21.93■■□□□ 1.1
CCDC25Q86WR0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
CCDC25Q86WR0 AL031602.1-201ENST00000633169 911 ntBASIC21.93■■□□□ 1.1
CCDC25Q86WR0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 AC239859.2-201ENST00000444165 318 ntBASIC21.92■■□□□ 1.1
CCDC25Q86WR0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 AL451085.2-201ENST00000605085 799 ntBASIC21.92■■□□□ 1.1
CCDC25Q86WR0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC25Q86WR0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 AL117332.1-201ENST00000622628 974 ntBASIC21.91■■□□□ 1.1
CCDC25Q86WR0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC25Q86WR0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC25Q86WR0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms