Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.32■□□□□ 0.52
RAI1Q7Z5J4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 AC083906.2-201ENST00000511578 360 ntBASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 CD99P1-205ENST00000527459 561 ntBASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 AP001160.3-201ENST00000601484 763 ntBASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 AC073210.2-201ENST00000430369 194 ntBASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 AC133552.2-202ENST00000575694 574 ntBASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI1Q7Z5J4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 LINC00526-201ENST00000581067 1875 ntBASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 AC133561.1-201ENST00000568600 2415 ntBASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAI1Q7Z5J4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 AC007322.4-201ENST00000509611 723 ntBASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAI1Q7Z5J4 AC087742.1-201ENST00000575880 1738 ntBASIC18.28■□□□□ 0.52
RAI1Q7Z5J4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAI1Q7Z5J4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RAI1Q7Z5J4 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.28■□□□□ 0.52
RAI1Q7Z5J4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.28■□□□□ 0.52
RAI1Q7Z5J4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAI1Q7Z5J4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.28■□□□□ 0.52
RAI1Q7Z5J4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAI1Q7Z5J4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 AC066615.1-201ENST00000640911 628 ntBASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 AC068338.2-201ENST00000563278 1430 ntBASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAI1Q7Z5J4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAI1Q7Z5J4 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.27■□□□□ 0.51
RAI1Q7Z5J4 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.27■□□□□ 0.51
RAI1Q7Z5J4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
RAI1Q7Z5J4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.27■□□□□ 0.51
RAI1Q7Z5J4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 TMEM191A-211ENST00000637163 1067 ntBASIC18.26■□□□□ 0.51
RAI1Q7Z5J4 AC127496.7-201ENST00000625110 1798 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms