Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPH1Q70E73 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.36■■□□□ 1.01
RAPH1Q70E73 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.36■■□□□ 1.01
RAPH1Q70E73 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAPH1Q70E73 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPH1Q70E73 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.36■■□□□ 1.01
RAPH1Q70E73 AL121603.2-201ENST00000557373 2117 ntBASIC21.36■■□□□ 1.01
RAPH1Q70E73 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.36■■□□□ 1.01
RAPH1Q70E73 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RAPH1Q70E73 Z98882.1-201ENST00000622160 2253 ntBASIC21.36■■□□□ 1.01
RAPH1Q70E73 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPH1Q70E73 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAPH1Q70E73 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAPH1Q70E73 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RAPH1Q70E73 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPH1Q70E73 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAPH1Q70E73 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPH1Q70E73 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPH1Q70E73 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAPH1Q70E73 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAPH1Q70E73 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.35■■□□□ 1.01
RAPH1Q70E73 AC026471.6-201ENST00000622954 1905 ntBASIC21.35■■□□□ 1.01
RAPH1Q70E73 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAPH1Q70E73 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RAPH1Q70E73 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPH1Q70E73 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPH1Q70E73 AL512631.2-201ENST00000604634 923 ntBASIC21.34■■□□□ 1.01
RAPH1Q70E73 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPH1Q70E73 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.34■■□□□ 1.01
RAPH1Q70E73 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPH1Q70E73 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAPH1Q70E73 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RAPH1Q70E73 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAPH1Q70E73 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.33■■□□□ 1.01
RAPH1Q70E73 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAPH1Q70E73 AC010141.3-201ENST00000456659 717 ntBASIC21.33■■□□□ 1.01
RAPH1Q70E73 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.33■■□□□ 1.01
RAPH1Q70E73 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.33■■□□□ 1.01
RAPH1Q70E73 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RAPH1Q70E73 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.33■■□□□ 1
RAPH1Q70E73 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1
RAPH1Q70E73 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAPH1Q70E73 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
RAPH1Q70E73 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAPH1Q70E73 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.33■■□□□ 1
RAPH1Q70E73 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RAPH1Q70E73 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RAPH1Q70E73 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAPH1Q70E73 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.32■■□□□ 1
RAPH1Q70E73 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RAPH1Q70E73 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAPH1Q70E73 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.32■■□□□ 1
RAPH1Q70E73 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAPH1Q70E73 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RAPH1Q70E73 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.32■■□□□ 1
RAPH1Q70E73 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAPH1Q70E73 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.32■■□□□ 1
RAPH1Q70E73 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAPH1Q70E73 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.32■■□□□ 1
RAPH1Q70E73 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.31■■□□□ 1
RAPH1Q70E73 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 AL356441.2-201ENST00000443009 864 ntBASIC21.31■■□□□ 1
RAPH1Q70E73 AC104564.3-201ENST00000582367 638 ntBASIC21.31■■□□□ 1
RAPH1Q70E73 AC010525.1-201ENST00000585559 441 ntBASIC21.31■■□□□ 1
RAPH1Q70E73 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.31■■□□□ 1
RAPH1Q70E73 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RAPH1Q70E73 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.31■■□□□ 1
RAPH1Q70E73 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 SYT6-210ENST00000641643 1587 ntBASIC21.31■■□□□ 1
RAPH1Q70E73 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPH1Q70E73 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.31■■□□□ 1
RAPH1Q70E73 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.3■■□□□ 1
RAPH1Q70E73 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.3■■□□□ 1
RAPH1Q70E73 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPH1Q70E73 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.3■■□□□ 1
RAPH1Q70E73 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.3■■□□□ 1
RAPH1Q70E73 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPH1Q70E73 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPH1Q70E73 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPH1Q70E73 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.3■■□□□ 1
RAPH1Q70E73 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPH1Q70E73 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.3■■□□□ 1
RAPH1Q70E73 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.3■■□□□ 1
RAPH1Q70E73 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.3■■□□□ 1
RAPH1Q70E73 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPH1Q70E73 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms