Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDHR3Q6ZTQ4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 MIR939-201ENST00000401314 82 ntBASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 AL031602.1-201ENST00000633169 911 ntBASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDHR3Q6ZTQ4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDHR3Q6ZTQ4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDHR3Q6ZTQ4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.39■■□□□ 1.02
CDHR3Q6ZTQ4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CDHR3Q6ZTQ4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDHR3Q6ZTQ4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 AC079089.2-201ENST00000531211 1277 ntBASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDHR3Q6ZTQ4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 AC091305.1-201ENST00000479476 895 ntBASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 AC008764.7-201ENST00000593779 1081 ntBASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.36■■□□□ 1.01
CDHR3Q6ZTQ4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 ZNRF2P3-201ENST00000424200 374 ntBASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 AC027682.1-201ENST00000562846 899 ntBASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.35■■□□□ 1.01
CDHR3Q6ZTQ4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDHR3Q6ZTQ4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms