Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 LINC00526-201ENST00000581067 1875 ntBASIC21.11■□□□□ 0.97
LYSMD4Q5XG99 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 AC097658.1-201ENST00000475555 843 ntBASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LYSMD4Q5XG99 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 RPS2P52-201ENST00000469610 820 ntBASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 AC083880.1-201ENST00000608266 535 ntBASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYSMD4Q5XG99 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 ESRRAP1-201ENST00000400596 1257 ntBASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 AP006294.2-201ENST00000641667 209 ntBASIC21.08■□□□□ 0.97
LYSMD4Q5XG99 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 DUSP5P2-201ENST00000426873 1033 ntBASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LYSMD4Q5XG99 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 AC098590.1-201ENST00000468126 897 ntBASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 MYC-209ENST00000641252 345 ntBASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD4Q5XG99 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 POU5F1P4-201ENST00000413175 1085 ntBASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD4Q5XG99 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD4Q5XG99 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms