Protein–RNA interactions for Protein: Q5VWM6

PRAMEF13, Putative PRAME family member 13, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13Q5VWM6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF13Q5VWM6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF13Q5VWM6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF13Q5VWM6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 AC027612.3-201ENST00000413684 1047 ntBASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 AC005224.4-201ENST00000583262 1652 ntBASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PRAMEF13Q5VWM6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF13Q5VWM6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF13Q5VWM6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
PRAMEF13Q5VWM6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.64■□□□□ 0.9
PRAMEF13Q5VWM6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 TPRG1LP1-201ENST00000598702 760 ntBASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEF13Q5VWM6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 AC010542.4-201ENST00000563151 1910 ntBASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 YBX1P1-201ENST00000445822 960 ntBASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 FBXW4P1-201ENST00000426721 2239 ntBASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRAMEF13Q5VWM6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 AC034268.1-201ENST00000441047 882 ntBASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PRAMEF13Q5VWM6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 AC055733.4-201ENST00000638462 1354 ntBASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRAMEF13Q5VWM6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PRAMEF13Q5VWM6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PRAMEF13Q5VWM6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF13Q5VWM6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
PRAMEF13Q5VWM6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF13Q5VWM6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF13Q5VWM6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF13Q5VWM6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF13Q5VWM6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms