Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 AC024257.2-201ENST00000549699 147 ntBASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 AC133561.4-201ENST00000566112 224 ntBASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 AL139246.5-201ENST00000606645 996 ntBASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 AC110285.6-201ENST00000617652 491 ntBASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATPAF1Q5TC12 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 AC004687.1-201ENST00000579003 1625 ntBASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATPAF1Q5TC12 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 OR2I1P-207ENST00000453522 948 ntBASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 PBX2P1-201ENST00000493219 1291 ntBASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATPAF1Q5TC12 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 AC244015.2-201ENST00000616358 1861 ntBASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATPAF1Q5TC12 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATPAF1Q5TC12 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.39■□□□□ 0.54
ATPAF1Q5TC12 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.39■□□□□ 0.54
ATPAF1Q5TC12 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.39■□□□□ 0.54
ATPAF1Q5TC12 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
ATPAF1Q5TC12 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATPAF1Q5TC12 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 EDA-201ENST00000338901 1233 ntBASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.39■□□□□ 0.53
ATPAF1Q5TC12 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms