Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 AL162412.1-201ENST00000567129 965 ntBASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC35.41■■■■□ 3.26
SNAPC4Q5SXM2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
SNAPC4Q5SXM2 AP004607.7-201ENST00000527152 1677 ntBASIC35.39■■■■□ 3.26
SNAPC4Q5SXM2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
SNAPC4Q5SXM2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
SNAPC4Q5SXM2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
SNAPC4Q5SXM2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC35.39■■■■□ 3.26
SNAPC4Q5SXM2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
SNAPC4Q5SXM2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC35.39■■■■□ 3.26
SNAPC4Q5SXM2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC35.39■■■■□ 3.26
SNAPC4Q5SXM2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC35.38■■■■□ 3.26
SNAPC4Q5SXM2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
SNAPC4Q5SXM2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
SNAPC4Q5SXM2 SERPINH1P1-201ENST00000419794 1249 ntBASIC35.38■■■■□ 3.25
SNAPC4Q5SXM2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
SNAPC4Q5SXM2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC35.38■■■■□ 3.25
SNAPC4Q5SXM2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC35.38■■■■□ 3.25
SNAPC4Q5SXM2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC35.37■■■■□ 3.25
SNAPC4Q5SXM2 MIR718-201ENST00000390190 70 ntBASIC35.37■■■■□ 3.25
SNAPC4Q5SXM2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
SNAPC4Q5SXM2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC35.37■■■■□ 3.25
SNAPC4Q5SXM2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
SNAPC4Q5SXM2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
SNAPC4Q5SXM2 EED-207ENST00000528180 1745 ntTSL 5 BASIC35.36■■■■□ 3.25
SNAPC4Q5SXM2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC35.35■■■■□ 3.25
SNAPC4Q5SXM2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC35.34■■■■□ 3.25
SNAPC4Q5SXM2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
SNAPC4Q5SXM2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
SNAPC4Q5SXM2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC35.34■■■■□ 3.25
SNAPC4Q5SXM2 AP006587.3-201ENST00000525742 1516 ntBASIC35.34■■■■□ 3.25
SNAPC4Q5SXM2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC35.34■■■■□ 3.25
SNAPC4Q5SXM2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
SNAPC4Q5SXM2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC35.33■■■■□ 3.25
SNAPC4Q5SXM2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC35.33■■■■□ 3.25
SNAPC4Q5SXM2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC35.33■■■■□ 3.25
SNAPC4Q5SXM2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC35.33■■■■□ 3.25
SNAPC4Q5SXM2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC35.33■■■■□ 3.25
SNAPC4Q5SXM2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC35.32■■■■□ 3.25
SNAPC4Q5SXM2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 RBM17P2-201ENST00000616397 1405 ntBASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC35.32■■■■□ 3.24
SNAPC4Q5SXM2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC35.31■■■■□ 3.24
SNAPC4Q5SXM2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
SNAPC4Q5SXM2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC35.31■■■■□ 3.24
SNAPC4Q5SXM2 SNORA78-201ENST00000459373 127 ntBASIC35.31■■■■□ 3.24
SNAPC4Q5SXM2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC35.31■■■■□ 3.24
SNAPC4Q5SXM2 AC079089.2-201ENST00000531211 1277 ntBASIC35.31■■■■□ 3.24
SNAPC4Q5SXM2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
SNAPC4Q5SXM2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC35.31■■■■□ 3.24
SNAPC4Q5SXM2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC35.3■■■■□ 3.24
SNAPC4Q5SXM2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC35.3■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms