Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 KRT18P20-201ENST00000548986 1279 ntBASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 SLC7A5P2-201ENST00000553010 536 ntBASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 AC053503.5-201ENST00000601508 636 ntBASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 AC010536.3-201ENST00000620306 533 ntBASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.29■□□□□ 0.68
RNFT1Q5M7Z0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 AL121832.2-201ENST00000610979 668 ntBASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNFT1Q5M7Z0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 C9orf163-202ENST00000624034 2573 ntBASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 GUSBP6-202ENST00000438529 1198 ntBASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 TSPY6P-201ENST00000448518 926 ntBASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.27■□□□□ 0.68
RNFT1Q5M7Z0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNFT1Q5M7Z0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RNFT1Q5M7Z0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNFT1Q5M7Z0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.27■□□□□ 0.67
RNFT1Q5M7Z0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNFT1Q5M7Z0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 AC142086.2-201ENST00000569753 217 ntBASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNFT1Q5M7Z0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RNFT1Q5M7Z0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.24■□□□□ 0.67
RNFT1Q5M7Z0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.24■□□□□ 0.67
RNFT1Q5M7Z0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.24■□□□□ 0.67
RNFT1Q5M7Z0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNFT1Q5M7Z0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNFT1Q5M7Z0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNFT1Q5M7Z0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms