Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDCD4Q53EL6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.47■□□□□ 0.87
PDCD4Q53EL6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDCD4Q53EL6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PDCD4Q53EL6 KRT16P3-201ENST00000439127 1283 ntBASIC20.47■□□□□ 0.87
PDCD4Q53EL6 AC010141.3-201ENST00000456659 717 ntBASIC20.47■□□□□ 0.87
PDCD4Q53EL6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.47■□□□□ 0.87
PDCD4Q53EL6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDCD4Q53EL6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDCD4Q53EL6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PDCD4Q53EL6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.46■□□□□ 0.87
PDCD4Q53EL6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
PDCD4Q53EL6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
PDCD4Q53EL6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PDCD4Q53EL6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 OXCT2P1-201ENST00000447263 1535 ntBASIC20.44■□□□□ 0.86
PDCD4Q53EL6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDCD4Q53EL6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 AL034346.1-201ENST00000568244 1277 ntBASIC20.43■□□□□ 0.86
PDCD4Q53EL6 AL356740.2-201ENST00000601559 647 ntBASIC20.43■□□□□ 0.86
PDCD4Q53EL6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDCD4Q53EL6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDCD4Q53EL6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.41■□□□□ 0.86
PDCD4Q53EL6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.41■□□□□ 0.86
PDCD4Q53EL6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms