Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST3H3Q16695 CLDN5-201ENST00000403084 2357 ntBASIC18.88■□□□□ 0.61
HIST3H3Q16695 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST3H3Q16695 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST3H3Q16695 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST3H3Q16695 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
HIST3H3Q16695 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST3H3Q16695 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST3H3Q16695 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST3H3Q16695 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HIST3H3Q16695 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST3H3Q16695 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST3H3Q16695 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.87■□□□□ 0.61
HIST3H3Q16695 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HIST3H3Q16695 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST3H3Q16695 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST3H3Q16695 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HIST3H3Q16695 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 AC005224.4-201ENST00000583262 1652 ntBASIC18.86■□□□□ 0.61
HIST3H3Q16695 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 AC105265.2-201ENST00000467189 838 ntBASIC18.86■□□□□ 0.61
HIST3H3Q16695 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 AL358852.1-201ENST00000623174 1268 ntBASIC18.86■□□□□ 0.61
HIST3H3Q16695 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.86■□□□□ 0.61
HIST3H3Q16695 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST3H3Q16695 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST3H3Q16695 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 IRS3P-201ENST00000223076 1006 ntBASIC18.85■□□□□ 0.61
HIST3H3Q16695 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST3H3Q16695 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST3H3Q16695 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.85■□□□□ 0.61
HIST3H3Q16695 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.84■□□□□ 0.61
HIST3H3Q16695 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST3H3Q16695 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST3H3Q16695 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST3H3Q16695 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST3H3Q16695 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST3H3Q16695 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST3H3Q16695 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST3H3Q16695 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST3H3Q16695 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.83■□□□□ 0.6
HIST3H3Q16695 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST3H3Q16695 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST3H3Q16695 TPRG1LP1-201ENST00000598702 760 ntBASIC18.83■□□□□ 0.6
HIST3H3Q16695 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST3H3Q16695 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST3H3Q16695 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST3H3Q16695 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST3H3Q16695 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
HIST3H3Q16695 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.82■□□□□ 0.6
HIST3H3Q16695 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H3Q16695 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H3Q16695 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H3Q16695 AC026310.3-201ENST00000625186 2373 ntBASIC18.82■□□□□ 0.6
HIST3H3Q16695 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIST3H3Q16695 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H3Q16695 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H3Q16695 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST3H3Q16695 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.82■□□□□ 0.6
HIST3H3Q16695 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIST3H3Q16695 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H3Q16695 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H3Q16695 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST3H3Q16695 AC007375.3-201ENST00000600936 2314 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms