Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH1Q08174 TSPY26P-201ENST00000476365 1326 ntBASIC20.59■□□□□ 0.89
PCDH1Q08174 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH1Q08174 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH1Q08174 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH1Q08174 AC009237.3-201ENST00000393279 1427 ntBASIC20.59■□□□□ 0.89
PCDH1Q08174 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDH1Q08174 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDH1Q08174 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
PCDH1Q08174 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDH1Q08174 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH1Q08174 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.58■□□□□ 0.89
PCDH1Q08174 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH1Q08174 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH1Q08174 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH1Q08174 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDH1Q08174 AC003102.1-202ENST00000563394 1796 ntBASIC20.58■□□□□ 0.89
PCDH1Q08174 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH1Q08174 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH1Q08174 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDH1Q08174 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH1Q08174 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH1Q08174 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH1Q08174 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDH1Q08174 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH1Q08174 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH1Q08174 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH1Q08174 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH1Q08174 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH1Q08174 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH1Q08174 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH1Q08174 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH1Q08174 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH1Q08174 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDH1Q08174 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH1Q08174 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDH1Q08174 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH1Q08174 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH1Q08174 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH1Q08174 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH1Q08174 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH1Q08174 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH1Q08174 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH1Q08174 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH1Q08174 AC105233.4-201ENST00000642045 216 ntBASIC20.56■□□□□ 0.88
PCDH1Q08174 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH1Q08174 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH1Q08174 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH1Q08174 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
PCDH1Q08174 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH1Q08174 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDH1Q08174 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PCDH1Q08174 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH1Q08174 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDH1Q08174 AC055733.4-201ENST00000638462 1354 ntBASIC20.55■□□□□ 0.88
PCDH1Q08174 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH1Q08174 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDH1Q08174 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH1Q08174 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH1Q08174 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
PCDH1Q08174 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH1Q08174 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH1Q08174 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH1Q08174 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH1Q08174 AC012414.1-201ENST00000556676 535 ntBASIC20.54■□□□□ 0.88
PCDH1Q08174 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDH1Q08174 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDH1Q08174 AC026310.3-201ENST00000625186 2373 ntBASIC20.54■□□□□ 0.88
PCDH1Q08174 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH1Q08174 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PCDH1Q08174 BX005040.4-201ENST00000637145 1518 ntBASIC20.53■□□□□ 0.88
PCDH1Q08174 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH1Q08174 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH1Q08174 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PCDH1Q08174 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH1Q08174 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH1Q08174 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
PCDH1Q08174 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDH1Q08174 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH1Q08174 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDH1Q08174 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH1Q08174 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms