Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 RCN2YOR220W 798 nt4.39□□□□□ -1.71
SSL2Q00578 YPL261CYPL261C 309 nt4.39□□□□□ -1.71
SSL2Q00578 SPC105YGL093W 2754 nt4.39□□□□□ -1.71
SSL2Q00578 SPB4YFL002C 1821 nt4.39□□□□□ -1.71
SSL2Q00578 ACA1YER045C 1470 nt4.38□□□□□ -1.71
SSL2Q00578 YGL082WYGL082W 1146 nt4.38□□□□□ -1.71
SSL2Q00578 MIC26YGR235C 702 nt4.38□□□□□ -1.71
SSL2Q00578 ECM34YHL043W 513 nt4.38□□□□□ -1.71
SSL2Q00578 YVH1YIR026C 1095 nt4.38□□□□□ -1.71
SSL2Q00578 YLR154W-BYLR154W-B 165 nt4.38□□□□□ -1.71
SSL2Q00578 RRN9YMR270C 1098 nt4.38□□□□□ -1.71
SSL2Q00578 RIB4YOL143C 510 nt4.38□□□□□ -1.71
SSL2Q00578 CTK1YKL139W 1587 nt4.38□□□□□ -1.71
SSL2Q00578 YSH1YLR277C 2340 nt4.38□□□□□ -1.71
SSL2Q00578 MCM7YBR202W 2538 nt4.37□□□□□ -1.71
SSL2Q00578 DBP3YGL078C 1572 nt4.37□□□□□ -1.71
SSL2Q00578 DTD1YDL219W 453 nt4.37□□□□□ -1.71
SSL2Q00578 LRS4YDR439W 1044 nt4.37□□□□□ -1.71
SSL2Q00578 YGL159WYGL159W 1113 nt4.37□□□□□ -1.71
SSL2Q00578 YHR180WYHR180W 492 nt4.37□□□□□ -1.71
SSL2Q00578 ARC15YIL062C 465 nt4.37□□□□□ -1.71
SSL2Q00578 YJL114WYJL114W 681 nt4.37□□□□□ -1.71
SSL2Q00578 IRC9YJL142C 393 nt4.37□□□□□ -1.71
SSL2Q00578 YKL131WYKL131W 522 nt4.37□□□□□ -1.71
SSL2Q00578 YNR042WYNR042W 429 nt4.37□□□□□ -1.71
SSL2Q00578 YGK3YOL128C 1128 nt4.37□□□□□ -1.71
SSL2Q00578 YLR152CYLR152C 1731 nt4.37□□□□□ -1.71
SSL2Q00578 GUK1YDR454C 564 nt4.36□□□□□ -1.71
SSL2Q00578 CNN1YFR046C 1086 nt4.36□□□□□ -1.71
SSL2Q00578 YHL009W-AYHL009W-A 1242 nt4.36□□□□□ -1.71
SSL2Q00578 BNA1YJR025C 534 nt4.36□□□□□ -1.71
SSL2Q00578 ECI1YLR284C 843 nt4.36□□□□□ -1.71
SSL2Q00578 MIX23YBL107C 591 nt4.36□□□□□ -1.71
SSL2Q00578 YPL205CYPL205C 345 nt4.36□□□□□ -1.71
SSL2Q00578 KIN2YLR096W 3444 nt4.36□□□□□ -1.71
SSL2Q00578 ROK1YGL171W 1695 nt4.35□□□□□ -1.71
SSL2Q00578 YDR008CYDR008C 351 nt4.35□□□□□ -1.71
SSL2Q00578 FCF1YDR339C 570 nt4.35□□□□□ -1.71
SSL2Q00578 NKP1YDR383C 717 nt4.35□□□□□ -1.71
SSL2Q00578 YER034WYER034W 558 nt4.35□□□□□ -1.71
SSL2Q00578 MND1YGL183C 660 nt4.35□□□□□ -1.71
SSL2Q00578 ULS1YOR191W 4860 nt4.35□□□□□ -1.71
SSL2Q00578 YGL140CYGL140C 3660 nt4.35□□□□□ -1.71
SSL2Q00578 AEP2YMR282C 1743 nt4.35□□□□□ -1.71
SSL2Q00578 HMG1YML075C 3165 nt4.35□□□□□ -1.71
SSL2Q00578 YML020WYML020W 1995 nt4.34□□□□□ -1.71
SSL2Q00578 SNT1YCR033W 3681 nt4.34□□□□□ -1.71
SSL2Q00578 HMO1YDR174W 741 nt4.34□□□□□ -1.71
SSL2Q00578 TAD1YGL243W 1203 nt4.34□□□□□ -1.71
SSL2Q00578 YGR160WYGR160W 612 nt4.34□□□□□ -1.71
SSL2Q00578 GPX1YKL026C 504 nt4.34□□□□□ -1.71
SSL2Q00578 BRX1YOL077C 876 nt4.34□□□□□ -1.71
SSL2Q00578 RRG8YPR116W 834 nt4.34□□□□□ -1.71
SSL2Q00578 APN2YBL019W 1563 nt4.34□□□□□ -1.71
SSL2Q00578 HOS3YPL116W 2094 nt4.34□□□□□ -1.71
SSL2Q00578 GLO3YER122C 1482 nt4.33□□□□□ -1.72
SSL2Q00578 AVT7YIL088C 1473 nt4.33□□□□□ -1.72
SSL2Q00578 TRM82YDR165W 1335 nt4.33□□□□□ -1.72
SSL2Q00578 UBC13YDR092W 462 nt4.33□□□□□ -1.72
SSL2Q00578 KEI1YDR367W 666 nt4.33□□□□□ -1.72
SSL2Q00578 DIG2YDR480W 972 nt4.33□□□□□ -1.72
SSL2Q00578 YGL108CYGL108C 423 nt4.33□□□□□ -1.72
SSL2Q00578 RPB3YIL021W 957 nt4.33□□□□□ -1.72
SSL2Q00578 YJL007CYJL007C 315 nt4.33□□□□□ -1.72
SSL2Q00578 YJR038CYJR038C 363 nt4.33□□□□□ -1.72
SSL2Q00578 YHC1YLR298C 696 nt4.33□□□□□ -1.72
SSL2Q00578 SWC7YLR385C 399 nt4.33□□□□□ -1.72
SSL2Q00578 YNL035CYNL035C 1170 nt4.33□□□□□ -1.72
SSL2Q00578 YNL203CYNL203C 612 nt4.33□□□□□ -1.72
SSL2Q00578 TAF14YPL129W 735 nt4.33□□□□□ -1.72
SSL2Q00578 YBR096WYBR096W 693 nt4.33□□□□□ -1.72
SSL2Q00578 YNR065CYNR065C 3351 nt4.33□□□□□ -1.72
SSL2Q00578 NUP133YKR082W 3474 nt4.33□□□□□ -1.72
SSL2Q00578 FAT1YBR041W 2010 nt4.33□□□□□ -1.72
SSL2Q00578 PLM2YDR501W 1566 nt4.32□□□□□ -1.72
SSL2Q00578 ISW2YOR304W 3363 nt4.32□□□□□ -1.72
SSL2Q00578 SPT23YKL020C 3249 nt4.32□□□□□ -1.72
SSL2Q00578 KRE29YER038C 1395 nt4.32□□□□□ -1.72
SSL2Q00578 MET17YLR303W 1335 nt4.32□□□□□ -1.72
SSL2Q00578 TAF10YDR167W 621 nt4.32□□□□□ -1.72
SSL2Q00578 YER084W-AYER084W-A 513 nt4.32□□□□□ -1.72
SSL2Q00578 YKE4YIL023C 1041 nt4.32□□□□□ -1.72
SSL2Q00578 YJR128WYJR128W 360 nt4.32□□□□□ -1.72
SSL2Q00578 PRM6YML047C 1059 nt4.32□□□□□ -1.72
SSL2Q00578 MRPL3YMR024W 1173 nt4.32□□□□□ -1.72
SSL2Q00578 YOL029CYOL029C 606 nt4.32□□□□□ -1.72
SSL2Q00578 DCS2YOR173W 1062 nt4.32□□□□□ -1.72
SSL2Q00578 PEP4YPL154C 1218 nt4.32□□□□□ -1.72
SSL2Q00578 YAR1YPL239W 603 nt4.32□□□□□ -1.72
SSL2Q00578 YPR170W-AYPR170W-A 186 nt4.32□□□□□ -1.72
SSL2Q00578 CTR86YCR054C 1692 nt4.32□□□□□ -1.72
SSL2Q00578 SST2YLR452C 2097 nt4.31□□□□□ -1.72
SSL2Q00578 FAD1YDL045C 921 nt4.31□□□□□ -1.72
SSL2Q00578 TMA17YDL110C 453 nt4.31□□□□□ -1.72
SSL2Q00578 SLU7YDR088C 1149 nt4.31□□□□□ -1.72
SSL2Q00578 YGL138CYGL138C 1038 nt4.31□□□□□ -1.72
SSL2Q00578 RSR1YGR152C 819 nt4.31□□□□□ -1.72
SSL2Q00578 YIL156W-AYIL156W-A 402 nt4.31□□□□□ -1.72
SSL2Q00578 SRP21YKL122C 504 nt4.31□□□□□ -1.72
SSL2Q00578 PIR3YKL163W 978 nt4.31□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 39.3 ms