Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB11AP62491 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RAB11AP62491 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB11AP62491 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB11AP62491 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB11AP62491 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB11AP62491 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB11AP62491 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB11AP62491 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB11AP62491 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB11AP62491 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.25■□□□□ 0.35
RAB11AP62491 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB11AP62491 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB11AP62491 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB11AP62491 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB11AP62491 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RAB11AP62491 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RAB11AP62491 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB11AP62491 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB11AP62491 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB11AP62491 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAB11AP62491 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB11AP62491 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RAB11AP62491 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB11AP62491 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB11AP62491 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB11AP62491 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB11AP62491 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RAB11AP62491 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB11AP62491 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RAB11AP62491 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB11AP62491 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB11AP62491 AC009102.2-201ENST00000606772 1639 ntBASIC17.23■□□□□ 0.35
RAB11AP62491 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB11AP62491 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB11AP62491 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAB11AP62491 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB11AP62491 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAB11AP62491 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB11AP62491 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.22■□□□□ 0.35
RAB11AP62491 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11AP62491 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11AP62491 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB11AP62491 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11AP62491 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RAB11AP62491 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
RAB11AP62491 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11AP62491 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RAB11AP62491 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB11AP62491 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB11AP62491 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
RAB11AP62491 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB11AP62491 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RAB11AP62491 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB11AP62491 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB11AP62491 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RAB11AP62491 AL033527.3-201ENST00000566366 1196 ntBASIC17.21■□□□□ 0.35
RAB11AP62491 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB11AP62491 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RAB11AP62491 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB11AP62491 AC007952.6-201ENST00000573168 2673 ntBASIC17.2■□□□□ 0.34
RAB11AP62491 AC003957.1-201ENST00000625108 2673 ntBASIC17.2■□□□□ 0.34
RAB11AP62491 AIRN-201ENST00000601203 4374 ntBASIC17.2■□□□□ 0.34
RAB11AP62491 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.2■□□□□ 0.34
RAB11AP62491 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB11AP62491 Z98882.1-201ENST00000622160 2253 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms