Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL049796.1-201ENST00000565336 1766 ntBASIC19.44■□□□□ 0.7
CXCR4P61073 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.44■□□□□ 0.7
CXCR4P61073 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CXCR4P61073 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.43■□□□□ 0.7
CXCR4P61073 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.43■□□□□ 0.7
CXCR4P61073 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXCR4P61073 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.43■□□□□ 0.7
CXCR4P61073 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CXCR4P61073 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXCR4P61073 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CXCR4P61073 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.43■□□□□ 0.7
CXCR4P61073 BX664725.1-201ENST00000438252 379 ntBASIC19.43■□□□□ 0.7
CXCR4P61073 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CXCR4P61073 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXCR4P61073 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CXCR4P61073 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.43■□□□□ 0.7
CXCR4P61073 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CXCR4P61073 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
CXCR4P61073 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CXCR4P61073 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.43■□□□□ 0.7
CXCR4P61073 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.42■□□□□ 0.7
CXCR4P61073 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CXCR4P61073 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCR4P61073 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXCR4P61073 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.42■□□□□ 0.7
CXCR4P61073 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CXCR4P61073 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.42■□□□□ 0.7
CXCR4P61073 AC026471.6-201ENST00000622954 1905 ntBASIC19.42■□□□□ 0.7
CXCR4P61073 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXCR4P61073 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CXCR4P61073 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.42■□□□□ 0.7
CXCR4P61073 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.42■□□□□ 0.7
CXCR4P61073 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.42■□□□□ 0.7
CXCR4P61073 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.42■□□□□ 0.7
CXCR4P61073 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
CXCR4P61073 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CXCR4P61073 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.41■□□□□ 0.7
CXCR4P61073 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCR4P61073 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCR4P61073 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CXCR4P61073 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.41■□□□□ 0.7
CXCR4P61073 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
CXCR4P61073 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CXCR4P61073 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.41■□□□□ 0.7
CXCR4P61073 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.41■□□□□ 0.7
CXCR4P61073 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.41■□□□□ 0.7
CXCR4P61073 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.41■□□□□ 0.7
CXCR4P61073 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCR4P61073 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.41■□□□□ 0.7
CXCR4P61073 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.41■□□□□ 0.7
CXCR4P61073 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCR4P61073 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.41■□□□□ 0.7
CXCR4P61073 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CXCR4P61073 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.4■□□□□ 0.7
CXCR4P61073 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CXCR4P61073 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCR4P61073 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCR4P61073 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCR4P61073 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CXCR4P61073 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CXCR4P61073 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCR4P61073 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCR4P61073 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCR4P61073 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.4■□□□□ 0.7
CXCR4P61073 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.4■□□□□ 0.7
CXCR4P61073 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.4■□□□□ 0.7
CXCR4P61073 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CXCR4P61073 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CXCR4P61073 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CXCR4P61073 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.4■□□□□ 0.7
CXCR4P61073 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CXCR4P61073 RNF165-205ENST00000588679 2904 ntBASIC19.39■□□□□ 0.7
CXCR4P61073 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CXCR4P61073 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.39■□□□□ 0.69
CXCR4P61073 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CXCR4P61073 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CXCR4P61073 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CXCR4P61073 AP005212.1-201ENST00000581547 1997 ntBASIC19.39■□□□□ 0.69
CXCR4P61073 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CXCR4P61073 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.39■□□□□ 0.69
CXCR4P61073 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CXCR4P61073 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCR4P61073 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CXCR4P61073 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCR4P61073 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CXCR4P61073 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCR4P61073 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.38■□□□□ 0.69
CXCR4P61073 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.38■□□□□ 0.69
CXCR4P61073 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms