Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRP54P61011 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRP54P61011 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SRP54P61011 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
SRP54P61011 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.03■□□□□ 0.96
SRP54P61011 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.03■□□□□ 0.96
SRP54P61011 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.03■□□□□ 0.96
SRP54P61011 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SRP54P61011 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.03■□□□□ 0.96
SRP54P61011 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SRP54P61011 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRP54P61011 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.03■□□□□ 0.96
SRP54P61011 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRP54P61011 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRP54P61011 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SRP54P61011 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.03■□□□□ 0.96
SRP54P61011 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRP54P61011 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.03■□□□□ 0.96
SRP54P61011 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRP54P61011 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.03■□□□□ 0.96
SRP54P61011 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.03■□□□□ 0.96
SRP54P61011 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP54P61011 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SRP54P61011 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.96
SRP54P61011 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP54P61011 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP54P61011 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP54P61011 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP54P61011 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.02■□□□□ 0.96
SRP54P61011 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.02■□□□□ 0.96
SRP54P61011 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.02■□□□□ 0.96
SRP54P61011 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP54P61011 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.02■□□□□ 0.96
SRP54P61011 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP54P61011 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRP54P61011 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.02■□□□□ 0.95
SRP54P61011 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SRP54P61011 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRP54P61011 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.01■□□□□ 0.95
SRP54P61011 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRP54P61011 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRP54P61011 UBE2DNL-204ENST00000602536 740 ntBASIC21.01■□□□□ 0.95
SRP54P61011 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.01■□□□□ 0.95
SRP54P61011 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRP54P61011 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRP54P61011 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SRP54P61011 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRP54P61011 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRP54P61011 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRP54P61011 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRP54P61011 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRP54P61011 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SRP54P61011 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21■□□□□ 0.95
SRP54P61011 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SRP54P61011 AC138907.5-202ENST00000569484 235 ntBASIC21■□□□□ 0.95
SRP54P61011 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRP54P61011 MFSD11-216ENST00000590393 1141 ntBASIC21■□□□□ 0.95
SRP54P61011 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRP54P61011 MDK-213ENST00000617138 635 ntTSL 2 BASIC21■□□□□ 0.95
SRP54P61011 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SRP54P61011 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21■□□□□ 0.95
SRP54P61011 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21■□□□□ 0.95
SRP54P61011 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SRP54P61011 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SRP54P61011 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.99■□□□□ 0.95
SRP54P61011 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.99■□□□□ 0.95
SRP54P61011 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.99■□□□□ 0.95
SRP54P61011 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.99■□□□□ 0.95
SRP54P61011 AC010141.2-201ENST00000452426 721 ntBASIC20.99■□□□□ 0.95
SRP54P61011 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRP54P61011 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.99■□□□□ 0.95
SRP54P61011 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.99■□□□□ 0.95
SRP54P61011 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRP54P61011 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRP54P61011 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRP54P61011 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.98■□□□□ 0.95
SRP54P61011 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SRP54P61011 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.98■□□□□ 0.95
SRP54P61011 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.98■□□□□ 0.95
SRP54P61011 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.98■□□□□ 0.95
SRP54P61011 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.98■□□□□ 0.95
SRP54P61011 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SRP54P61011 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRP54P61011 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.97■□□□□ 0.95
SRP54P61011 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SRP54P61011 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRP54P61011 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRP54P61011 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms