Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RIPPLY3P57055 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPPLY3P57055 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPPLY3P57055 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RIPPLY3P57055 AP001160.3-201ENST00000601484 763 ntBASIC17.67■□□□□ 0.42
RIPPLY3P57055 AL121906.2-201ENST00000621597 723 ntBASIC17.67■□□□□ 0.42
RIPPLY3P57055 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RIPPLY3P57055 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RIPPLY3P57055 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.67■□□□□ 0.42
RIPPLY3P57055 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPPLY3P57055 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIPPLY3P57055 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RIPPLY3P57055 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPPLY3P57055 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.66■□□□□ 0.42
RIPPLY3P57055 DUSP8P4-201ENST00000399538 1761 ntBASIC17.66■□□□□ 0.42
RIPPLY3P57055 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPPLY3P57055 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RIPPLY3P57055 AC093787.1-201ENST00000450396 207 ntBASIC17.66■□□□□ 0.42
RIPPLY3P57055 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.66■□□□□ 0.42
RIPPLY3P57055 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPPLY3P57055 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPPLY3P57055 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RIPPLY3P57055 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RIPPLY3P57055 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.65■□□□□ 0.42
RIPPLY3P57055 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.65■□□□□ 0.42
RIPPLY3P57055 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RIPPLY3P57055 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RIPPLY3P57055 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.65■□□□□ 0.42
RIPPLY3P57055 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.65■□□□□ 0.42
RIPPLY3P57055 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.65■□□□□ 0.42
RIPPLY3P57055 RN7SL471P-201ENST00000580476 299 ntBASIC17.65■□□□□ 0.42
RIPPLY3P57055 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.65■□□□□ 0.42
RIPPLY3P57055 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RIPPLY3P57055 AL022069.1-201ENST00000568025 1636 ntBASIC17.65■□□□□ 0.42
RIPPLY3P57055 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.64■□□□□ 0.41
RIPPLY3P57055 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.64■□□□□ 0.41
RIPPLY3P57055 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RIPPLY3P57055 AC016405.3-201ENST00000607710 860 ntBASIC17.64■□□□□ 0.41
RIPPLY3P57055 GPALPP1-207ENST00000611650 899 ntBASIC17.64■□□□□ 0.41
RIPPLY3P57055 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RIPPLY3P57055 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RIPPLY3P57055 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 RPS2P55-201ENST00000397318 883 ntBASIC17.63■□□□□ 0.41
RIPPLY3P57055 KRT17P3-201ENST00000420566 1262 ntBASIC17.63■□□□□ 0.41
RIPPLY3P57055 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 AC107956.1-201ENST00000494359 873 ntBASIC17.63■□□□□ 0.41
RIPPLY3P57055 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RIPPLY3P57055 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
RIPPLY3P57055 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RIPPLY3P57055 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.62■□□□□ 0.41
RIPPLY3P57055 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RIPPLY3P57055 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RIPPLY3P57055 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RIPPLY3P57055 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.62■□□□□ 0.41
RIPPLY3P57055 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.62■□□□□ 0.41
RIPPLY3P57055 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RIPPLY3P57055 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RIPPLY3P57055 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RIPPLY3P57055 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RIPPLY3P57055 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RIPPLY3P57055 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RIPPLY3P57055 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RIPPLY3P57055 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RIPPLY3P57055 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RIPPLY3P57055 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.61■□□□□ 0.41
RIPPLY3P57055 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.61■□□□□ 0.41
RIPPLY3P57055 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RIPPLY3P57055 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms