Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN12P56749 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN12P56749 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CLDN12P56749 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLDN12P56749 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN12P56749 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLDN12P56749 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLDN12P56749 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN12P56749 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CLDN12P56749 AC104564.3-201ENST00000582367 638 ntBASIC18.5■□□□□ 0.55
CLDN12P56749 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN12P56749 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN12P56749 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN12P56749 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN12P56749 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN12P56749 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN12P56749 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN12P56749 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN12P56749 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN12P56749 AL121603.2-201ENST00000557373 2117 ntBASIC18.49■□□□□ 0.55
CLDN12P56749 BX664725.1-201ENST00000438252 379 ntBASIC18.49■□□□□ 0.55
CLDN12P56749 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.49■□□□□ 0.55
CLDN12P56749 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN12P56749 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN12P56749 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN12P56749 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN12P56749 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN12P56749 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN12P56749 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN12P56749 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLDN12P56749 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN12P56749 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN12P56749 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN12P56749 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CLDN12P56749 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN12P56749 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN12P56749 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN12P56749 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN12P56749 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN12P56749 AC079089.2-201ENST00000531211 1277 ntBASIC18.48■□□□□ 0.55
CLDN12P56749 AL499627.2-201ENST00000606283 725 ntBASIC18.48■□□□□ 0.55
CLDN12P56749 AC012354.3-201ENST00000623734 483 ntBASIC18.48■□□□□ 0.55
CLDN12P56749 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN12P56749 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN12P56749 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN12P56749 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN12P56749 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN12P56749 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLDN12P56749 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN12P56749 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN12P56749 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN12P56749 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN12P56749 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CLDN12P56749 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
CLDN12P56749 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CLDN12P56749 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN12P56749 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN12P56749 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN12P56749 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN12P56749 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN12P56749 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN12P56749 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CLDN12P56749 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN12P56749 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CLDN12P56749 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CLDN12P56749 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CLDN12P56749 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CLDN12P56749 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN12P56749 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN12P56749 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.46■□□□□ 0.55
CLDN12P56749 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDN12P56749 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 OR7E47P-201ENST00000546390 1422 ntBASIC18.46■□□□□ 0.55
CLDN12P56749 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CLDN12P56749 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.46■□□□□ 0.55
CLDN12P56749 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.46■□□□□ 0.55
CLDN12P56749 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDN12P56749 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN12P56749 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN12P56749 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.45■□□□□ 0.54
CLDN12P56749 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN12P56749 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN12P56749 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN12P56749 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN12P56749 FEM1AP1-201ENST00000431297 1995 ntBASIC18.45■□□□□ 0.54
CLDN12P56749 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN12P56749 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDN12P56749 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDN12P56749 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDN12P56749 AC092028.1-203ENST00000608262 953 ntBASIC18.45■□□□□ 0.54
CLDN12P56749 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLDN12P56749 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDN12P56749 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms