Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H2P55055 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.09■□□□□ 0.81
NR1H2P55055 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
NR1H2P55055 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NR1H2P55055 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.09■□□□□ 0.81
NR1H2P55055 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.09■□□□□ 0.81
NR1H2P55055 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NR1H2P55055 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H2P55055 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NR1H2P55055 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H2P55055 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H2P55055 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H2P55055 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NR1H2P55055 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H2P55055 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H2P55055 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NR1H2P55055 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H2P55055 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H2P55055 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NR1H2P55055 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H2P55055 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.08■□□□□ 0.81
NR1H2P55055 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H2P55055 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.08■□□□□ 0.81
NR1H2P55055 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NR1H2P55055 Z98882.1-201ENST00000622160 2253 ntBASIC20.07■□□□□ 0.8
NR1H2P55055 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.07■□□□□ 0.8
NR1H2P55055 AL022069.1-201ENST00000568025 1636 ntBASIC20.07■□□□□ 0.8
NR1H2P55055 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H2P55055 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.07■□□□□ 0.8
NR1H2P55055 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H2P55055 AL512631.2-201ENST00000604634 923 ntBASIC20.07■□□□□ 0.8
NR1H2P55055 MIR4466-201ENST00000606121 54 ntBASIC20.07■□□□□ 0.8
NR1H2P55055 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.07■□□□□ 0.8
NR1H2P55055 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NR1H2P55055 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.07■□□□□ 0.8
NR1H2P55055 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H2P55055 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR1H2P55055 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NR1H2P55055 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
NR1H2P55055 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.06■□□□□ 0.8
NR1H2P55055 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.06■□□□□ 0.8
NR1H2P55055 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.06■□□□□ 0.8
NR1H2P55055 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR1H2P55055 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.05■□□□□ 0.8
NR1H2P55055 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.05■□□□□ 0.8
NR1H2P55055 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NR1H2P55055 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.05■□□□□ 0.8
NR1H2P55055 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NR1H2P55055 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
NR1H2P55055 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.05■□□□□ 0.8
NR1H2P55055 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR1H2P55055 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.04■□□□□ 0.8
NR1H2P55055 AC004448.1-201ENST00000458332 883 ntBASIC20.04■□□□□ 0.8
NR1H2P55055 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.04■□□□□ 0.8
NR1H2P55055 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
NR1H2P55055 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR1H2P55055 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NR1H2P55055 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.04■□□□□ 0.8
NR1H2P55055 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.03■□□□□ 0.8
NR1H2P55055 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.03■□□□□ 0.8
NR1H2P55055 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H2P55055 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
NR1H2P55055 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H2P55055 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR1H2P55055 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NR1H2P55055 AC096631.2-201ENST00000436136 790 ntBASIC20.03■□□□□ 0.8
NR1H2P55055 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms