Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
CLNS1AP54105 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLNS1AP54105 AC021242.3-201ENST00000607598 1377 ntBASIC21.1■□□□□ 0.97
CLNS1AP54105 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.1■□□□□ 0.97
CLNS1AP54105 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLNS1AP54105 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLNS1AP54105 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLNS1AP54105 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLNS1AP54105 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CLNS1AP54105 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLNS1AP54105 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.1■□□□□ 0.97
CLNS1AP54105 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLNS1AP54105 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLNS1AP54105 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLNS1AP54105 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLNS1AP54105 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CLNS1AP54105 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLNS1AP54105 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.09■□□□□ 0.97
CLNS1AP54105 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 BX664725.1-201ENST00000438252 379 ntBASIC21.09■□□□□ 0.97
CLNS1AP54105 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.09■□□□□ 0.97
CLNS1AP54105 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.09■□□□□ 0.97
CLNS1AP54105 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLNS1AP54105 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLNS1AP54105 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLNS1AP54105 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLNS1AP54105 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.08■□□□□ 0.97
CLNS1AP54105 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLNS1AP54105 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.08■□□□□ 0.97
CLNS1AP54105 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLNS1AP54105 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLNS1AP54105 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLNS1AP54105 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.08■□□□□ 0.97
CLNS1AP54105 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.08■□□□□ 0.97
CLNS1AP54105 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLNS1AP54105 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLNS1AP54105 AC080038.3-201ENST00000623346 1952 ntBASIC21.08■□□□□ 0.96
CLNS1AP54105 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLNS1AP54105 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.08■□□□□ 0.96
CLNS1AP54105 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLNS1AP54105 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CLNS1AP54105 AC087742.1-201ENST00000575880 1738 ntBASIC21.07■□□□□ 0.96
CLNS1AP54105 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLNS1AP54105 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLNS1AP54105 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CLNS1AP54105 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLNS1AP54105 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLNS1AP54105 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.07■□□□□ 0.96
CLNS1AP54105 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CLNS1AP54105 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLNS1AP54105 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CLNS1AP54105 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CLNS1AP54105 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLNS1AP54105 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLNS1AP54105 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CLNS1AP54105 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.06■□□□□ 0.96
CLNS1AP54105 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.06■□□□□ 0.96
CLNS1AP54105 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.06■□□□□ 0.96
CLNS1AP54105 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CLNS1AP54105 AC009086.3-201ENST00000623486 1008 ntBASIC21.06■□□□□ 0.96
CLNS1AP54105 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CLNS1AP54105 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLNS1AP54105 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLNS1AP54105 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.05■□□□□ 0.96
CLNS1AP54105 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLNS1AP54105 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLNS1AP54105 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLNS1AP54105 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.05■□□□□ 0.96
CLNS1AP54105 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLNS1AP54105 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLNS1AP54105 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.05■□□□□ 0.96
CLNS1AP54105 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLNS1AP54105 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CLNS1AP54105 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.05■□□□□ 0.96
CLNS1AP54105 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.05■□□□□ 0.96
CLNS1AP54105 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLNS1AP54105 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CLNS1AP54105 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLNS1AP54105 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLNS1AP54105 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms