Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC30.87■■■□□ 2.53
CLTCL1P53675 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC30.87■■■□□ 2.53
CLTCL1P53675 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLTCL1P53675 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC30.86■■■□□ 2.53
CLTCL1P53675 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC30.86■■■□□ 2.53
CLTCL1P53675 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLTCL1P53675 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.86■■■□□ 2.53
CLTCL1P53675 BMP1-204ENST00000397814 836 ntTSL 4 BASIC30.86■■■□□ 2.53
CLTCL1P53675 TERF1P5-201ENST00000477545 1207 ntBASIC30.86■■■□□ 2.53
CLTCL1P53675 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC30.86■■■□□ 2.53
CLTCL1P53675 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CLTCL1P53675 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC30.86■■■□□ 2.53
CLTCL1P53675 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
CLTCL1P53675 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CLTCL1P53675 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC30.86■■■□□ 2.53
CLTCL1P53675 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC30.86■■■□□ 2.53
CLTCL1P53675 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLTCL1P53675 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLTCL1P53675 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLTCL1P53675 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLTCL1P53675 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLTCL1P53675 AC073210.2-201ENST00000430369 194 ntBASIC30.85■■■□□ 2.53
CLTCL1P53675 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC30.85■■■□□ 2.53
CLTCL1P53675 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC30.85■■■□□ 2.53
CLTCL1P53675 AC016405.3-201ENST00000607710 860 ntBASIC30.85■■■□□ 2.53
CLTCL1P53675 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLTCL1P53675 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLTCL1P53675 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CLTCL1P53675 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CLTCL1P53675 AC093787.1-201ENST00000450396 207 ntBASIC30.84■■■□□ 2.53
CLTCL1P53675 TSPY20P-201ENST00000450910 630 ntBASIC30.84■■■□□ 2.53
CLTCL1P53675 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC30.84■■■□□ 2.53
CLTCL1P53675 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.84■■■□□ 2.53
CLTCL1P53675 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CLTCL1P53675 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CLTCL1P53675 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CLTCL1P53675 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
CLTCL1P53675 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CLTCL1P53675 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
CLTCL1P53675 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.84■■■□□ 2.53
CLTCL1P53675 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC30.84■■■□□ 2.53
CLTCL1P53675 PFKL-212ENST00000628044 129 ntTSL 3 BASIC30.84■■■□□ 2.53
CLTCL1P53675 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC30.83■■■□□ 2.53
CLTCL1P53675 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CLTCL1P53675 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.83■■■□□ 2.53
CLTCL1P53675 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.83■■■□□ 2.53
CLTCL1P53675 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC30.83■■■□□ 2.53
CLTCL1P53675 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CLTCL1P53675 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC30.83■■■□□ 2.53
CLTCL1P53675 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CLTCL1P53675 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC30.83■■■□□ 2.53
CLTCL1P53675 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CLTCL1P53675 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.83■■■□□ 2.53
CLTCL1P53675 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.83■■■□□ 2.53
CLTCL1P53675 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLTCL1P53675 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLTCL1P53675 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLTCL1P53675 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC30.82■■■□□ 2.52
CLTCL1P53675 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLTCL1P53675 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CLTCL1P53675 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CLTCL1P53675 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
CLTCL1P53675 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
CLTCL1P53675 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CLTCL1P53675 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CLTCL1P53675 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CLTCL1P53675 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CLTCL1P53675 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
CLTCL1P53675 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
CLTCL1P53675 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC30.81■■■□□ 2.52
CLTCL1P53675 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC30.81■■■□□ 2.52
CLTCL1P53675 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CLTCL1P53675 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC30.81■■■□□ 2.52
CLTCL1P53675 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CLTCL1P53675 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC30.81■■■□□ 2.52
CLTCL1P53675 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CLTCL1P53675 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CLTCL1P53675 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CLTCL1P53675 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CLTCL1P53675 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.8■■■□□ 2.52
CLTCL1P53675 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CLTCL1P53675 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CLTCL1P53675 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CLTCL1P53675 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
CLTCL1P53675 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CLTCL1P53675 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC30.8■■■□□ 2.52
CLTCL1P53675 RGMA-211ENST00000557420 989 ntTSL 3 BASIC30.8■■■□□ 2.52
CLTCL1P53675 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CLTCL1P53675 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CLTCL1P53675 MKRN4P-201ENST00000444706 1521 ntBASIC30.79■■■□□ 2.52
CLTCL1P53675 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
CLTCL1P53675 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
CLTCL1P53675 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.79■■■□□ 2.52
CLTCL1P53675 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC30.79■■■□□ 2.52
CLTCL1P53675 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CLTCL1P53675 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CLTCL1P53675 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CLTCL1P53675 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CLTCL1P53675 AC083880.1-201ENST00000608266 535 ntBASIC30.78■■■□□ 2.52
CLTCL1P53675 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms