Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LIMK1P53667 OR10C1-204ENST00000622521 1039 ntBASIC21.17■□□□□ 0.98
LIMK1P53667 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LIMK1P53667 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK1P53667 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.17■□□□□ 0.98
LIMK1P53667 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.17■□□□□ 0.98
LIMK1P53667 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK1P53667 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.17■□□□□ 0.98
LIMK1P53667 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIMK1P53667 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LIMK1P53667 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.16■□□□□ 0.98
LIMK1P53667 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LIMK1P53667 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.16■□□□□ 0.98
LIMK1P53667 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.16■□□□□ 0.98
LIMK1P53667 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LIMK1P53667 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIMK1P53667 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LIMK1P53667 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIMK1P53667 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIMK1P53667 AL512625.2-201ENST00000417533 625 ntBASIC21.15■□□□□ 0.98
LIMK1P53667 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.15■□□□□ 0.98
LIMK1P53667 CYP2T1P-201ENST00000432607 1285 ntBASIC21.15■□□□□ 0.98
LIMK1P53667 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.15■□□□□ 0.98
LIMK1P53667 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIMK1P53667 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIMK1P53667 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.15■□□□□ 0.98
LIMK1P53667 AC004687.1-201ENST00000579003 1625 ntBASIC21.15■□□□□ 0.98
LIMK1P53667 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LIMK1P53667 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.14■□□□□ 0.98
LIMK1P53667 AC004812.2-201ENST00000611079 2094 ntBASIC21.14■□□□□ 0.98
LIMK1P53667 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LIMK1P53667 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.14■□□□□ 0.98
LIMK1P53667 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.14■□□□□ 0.97
LIMK1P53667 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK1P53667 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.14■□□□□ 0.97
LIMK1P53667 AC007322.4-201ENST00000509611 723 ntBASIC21.14■□□□□ 0.97
LIMK1P53667 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK1P53667 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIMK1P53667 AC068338.2-201ENST00000563278 1430 ntBASIC21.13■□□□□ 0.97
LIMK1P53667 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK1P53667 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.13■□□□□ 0.97
LIMK1P53667 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.13■□□□□ 0.97
LIMK1P53667 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.13■□□□□ 0.97
LIMK1P53667 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.13■□□□□ 0.97
LIMK1P53667 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.13■□□□□ 0.97
LIMK1P53667 AC010141.2-201ENST00000452426 721 ntBASIC21.13■□□□□ 0.97
LIMK1P53667 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.13■□□□□ 0.97
LIMK1P53667 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.13■□□□□ 0.97
LIMK1P53667 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.13■□□□□ 0.97
LIMK1P53667 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.13■□□□□ 0.97
LIMK1P53667 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
LIMK1P53667 AC083880.1-201ENST00000608266 535 ntBASIC21.13■□□□□ 0.97
LIMK1P53667 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK1P53667 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK1P53667 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK1P53667 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK1P53667 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LIMK1P53667 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIMK1P53667 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LIMK1P53667 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LIMK1P53667 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.12■□□□□ 0.97
LIMK1P53667 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LIMK1P53667 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.12■□□□□ 0.97
LIMK1P53667 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LIMK1P53667 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.12■□□□□ 0.97
LIMK1P53667 AC128676.1-201ENST00000454392 318 ntBASIC21.12■□□□□ 0.97
LIMK1P53667 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LIMK1P53667 AC006058.3-201ENST00000606217 1069 ntBASIC21.12■□□□□ 0.97
LIMK1P53667 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.12■□□□□ 0.97
LIMK1P53667 MYC-209ENST00000641252 345 ntBASIC21.12■□□□□ 0.97
LIMK1P53667 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LIMK1P53667 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LIMK1P53667 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.12■□□□□ 0.97
LIMK1P53667 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LIMK1P53667 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LIMK1P53667 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LIMK1P53667 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
LIMK1P53667 TERF1P5-201ENST00000477545 1207 ntBASIC21.11■□□□□ 0.97
LIMK1P53667 UNC93B4-201ENST00000505679 747 ntBASIC21.11■□□□□ 0.97
LIMK1P53667 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.11■□□□□ 0.97
LIMK1P53667 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.11■□□□□ 0.97
LIMK1P53667 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.11■□□□□ 0.97
LIMK1P53667 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LIMK1P53667 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LIMK1P53667 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
LIMK1P53667 AC097658.1-201ENST00000475555 843 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms