Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGA2P52926 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGA2P52926 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGA2P52926 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGA2P52926 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGA2P52926 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGA2P52926 FEM1AP1-201ENST00000431297 1995 ntBASIC19.51■□□□□ 0.71
HMGA2P52926 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGA2P52926 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGA2P52926 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGA2P52926 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
HMGA2P52926 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGA2P52926 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGA2P52926 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGA2P52926 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGA2P52926 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGA2P52926 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA2P52926 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA2P52926 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HMGA2P52926 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HMGA2P52926 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA2P52926 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HMGA2P52926 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA2P52926 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HMGA2P52926 RARRES2P1-201ENST00000474487 481 ntBASIC19.49■□□□□ 0.71
HMGA2P52926 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA2P52926 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGA2P52926 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGA2P52926 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA2P52926 LINC01006-201ENST00000333319 2292 ntBASIC19.49■□□□□ 0.71
HMGA2P52926 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA2P52926 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.48■□□□□ 0.71
HMGA2P52926 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
HMGA2P52926 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HMGA2P52926 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGA2P52926 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HMGA2P52926 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA2P52926 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGA2P52926 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA2P52926 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA2P52926 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA2P52926 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA2P52926 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGA2P52926 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGA2P52926 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
HMGA2P52926 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGA2P52926 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.47■□□□□ 0.71
HMGA2P52926 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA2P52926 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
HMGA2P52926 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA2P52926 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA2P52926 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.47■□□□□ 0.71
HMGA2P52926 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
HMGA2P52926 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGA2P52926 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGA2P52926 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGA2P52926 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGA2P52926 PKD1P6-201ENST00000343738 4769 ntBASIC19.46■□□□□ 0.71
HMGA2P52926 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
HMGA2P52926 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGA2P52926 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGA2P52926 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA2P52926 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
HMGA2P52926 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGA2P52926 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA2P52926 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA2P52926 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HMGA2P52926 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGA2P52926 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HMGA2P52926 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HMGA2P52926 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms