Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN4P51793 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CLCN4P51793 CYP2T1P-201ENST00000432607 1285 ntBASIC22.56■■□□□ 1.2
CLCN4P51793 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CLCN4P51793 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.56■■□□□ 1.2
CLCN4P51793 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.56■■□□□ 1.2
CLCN4P51793 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.56■■□□□ 1.2
CLCN4P51793 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.56■■□□□ 1.2
CLCN4P51793 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN4P51793 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.56■■□□□ 1.2
CLCN4P51793 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN4P51793 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN4P51793 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CLCN4P51793 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLCN4P51793 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN4P51793 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CLCN4P51793 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN4P51793 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN4P51793 FAM201B-201ENST00000458407 597 ntBASIC22.55■■□□□ 1.2
CLCN4P51793 AC007322.4-201ENST00000509611 723 ntBASIC22.55■■□□□ 1.2
CLCN4P51793 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.55■■□□□ 1.2
CLCN4P51793 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.55■■□□□ 1.2
CLCN4P51793 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CLCN4P51793 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CLCN4P51793 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN4P51793 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLCN4P51793 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CLCN4P51793 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.54■■□□□ 1.2
CLCN4P51793 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN4P51793 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CLCN4P51793 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN4P51793 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN4P51793 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.54■■□□□ 1.2
CLCN4P51793 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.54■■□□□ 1.2
CLCN4P51793 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.54■■□□□ 1.2
CLCN4P51793 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CLCN4P51793 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
CLCN4P51793 MIR4758-201ENST00000577688 71 ntBASIC22.54■■□□□ 1.2
CLCN4P51793 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN4P51793 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
CLCN4P51793 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CLCN4P51793 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CLCN4P51793 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CLCN4P51793 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN4P51793 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN4P51793 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN4P51793 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.53■■□□□ 1.2
CLCN4P51793 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.53■■□□□ 1.2
CLCN4P51793 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN4P51793 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN4P51793 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN4P51793 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.53■■□□□ 1.2
CLCN4P51793 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN4P51793 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CLCN4P51793 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN4P51793 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN4P51793 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
CLCN4P51793 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN4P51793 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN4P51793 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN4P51793 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN4P51793 MIPEPP3-201ENST00000412105 444 ntBASIC22.52■■□□□ 1.2
CLCN4P51793 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.52■■□□□ 1.2
CLCN4P51793 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CLCN4P51793 MKRN4P-201ENST00000444706 1521 ntBASIC22.52■■□□□ 1.19
CLCN4P51793 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN4P51793 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN4P51793 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CLCN4P51793 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN4P51793 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN4P51793 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCN4P51793 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.51■■□□□ 1.19
CLCN4P51793 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN4P51793 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CLCN4P51793 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCN4P51793 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.51■■□□□ 1.19
CLCN4P51793 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.5■■□□□ 1.19
CLCN4P51793 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
CLCN4P51793 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.5■■□□□ 1.19
CLCN4P51793 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.5■■□□□ 1.19
CLCN4P51793 OR10C1-204ENST00000622521 1039 ntBASIC22.5■■□□□ 1.19
CLCN4P51793 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CLCN4P51793 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.49■■□□□ 1.19
CLCN4P51793 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CLCN4P51793 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN4P51793 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN4P51793 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.49■■□□□ 1.19
CLCN4P51793 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.49■■□□□ 1.19
CLCN4P51793 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.49■■□□□ 1.19
CLCN4P51793 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.49■■□□□ 1.19
CLCN4P51793 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN4P51793 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms