Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.7■□□□□ 0.58
HCFC1P51610 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
HCFC1P51610 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.7■□□□□ 0.58
HCFC1P51610 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCFC1P51610 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HCFC1P51610 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.7■□□□□ 0.58
HCFC1P51610 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.7■□□□□ 0.58
HCFC1P51610 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HCFC1P51610 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.7■□□□□ 0.58
HCFC1P51610 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HCFC1P51610 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.7■□□□□ 0.58
HCFC1P51610 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.7■□□□□ 0.58
HCFC1P51610 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC1P51610 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC1P51610 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.69■□□□□ 0.58
HCFC1P51610 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC1P51610 AC016405.3-201ENST00000607710 860 ntBASIC18.69■□□□□ 0.58
HCFC1P51610 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC1P51610 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC1P51610 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC1P51610 AC068473.5-201ENST00000616428 2072 ntBASIC18.69■□□□□ 0.58
HCFC1P51610 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC1P51610 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC1P51610 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.69■□□□□ 0.58
HCFC1P51610 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.69■□□□□ 0.58
HCFC1P51610 RPS2P52-201ENST00000469610 820 ntBASIC18.69■□□□□ 0.58
HCFC1P51610 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.69■□□□□ 0.58
HCFC1P51610 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HCFC1P51610 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.69■□□□□ 0.58
HCFC1P51610 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC1P51610 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC1P51610 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC1P51610 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC1P51610 AP006587.3-201ENST00000525742 1516 ntBASIC18.68■□□□□ 0.58
HCFC1P51610 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC1P51610 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.68■□□□□ 0.58
HCFC1P51610 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC1P51610 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HCFC1P51610 C9orf163-202ENST00000624034 2573 ntBASIC18.68■□□□□ 0.58
HCFC1P51610 LINC00526-201ENST00000581067 1875 ntBASIC18.68■□□□□ 0.58
HCFC1P51610 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.68■□□□□ 0.58
HCFC1P51610 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
HCFC1P51610 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC1P51610 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.67■□□□□ 0.58
HCFC1P51610 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.67■□□□□ 0.58
HCFC1P51610 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.67■□□□□ 0.58
HCFC1P51610 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HCFC1P51610 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HCFC1P51610 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC1P51610 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC1P51610 OR7E47P-201ENST00000546390 1422 ntBASIC18.67■□□□□ 0.58
HCFC1P51610 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC1P51610 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HCFC1P51610 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.67■□□□□ 0.58
HCFC1P51610 AC098590.1-201ENST00000468126 897 ntBASIC18.67■□□□□ 0.58
HCFC1P51610 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.67■□□□□ 0.58
HCFC1P51610 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HCFC1P51610 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.67■□□□□ 0.58
HCFC1P51610 AC012676.1-201ENST00000574705 1949 ntBASIC18.67■□□□□ 0.58
HCFC1P51610 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.66■□□□□ 0.58
HCFC1P51610 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC1P51610 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.66■□□□□ 0.58
HCFC1P51610 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.66■□□□□ 0.58
HCFC1P51610 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC1P51610 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.66■□□□□ 0.58
HCFC1P51610 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.66■□□□□ 0.58
HCFC1P51610 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC1P51610 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.66■□□□□ 0.58
HCFC1P51610 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HCFC1P51610 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.65■□□□□ 0.58
HCFC1P51610 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.65■□□□□ 0.58
HCFC1P51610 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.65■□□□□ 0.58
HCFC1P51610 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.65■□□□□ 0.58
HCFC1P51610 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.65■□□□□ 0.58
HCFC1P51610 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.65■□□□□ 0.58
HCFC1P51610 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.65■□□□□ 0.58
HCFC1P51610 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.65■□□□□ 0.58
HCFC1P51610 MIR4758-201ENST00000577688 71 ntBASIC18.65■□□□□ 0.58
HCFC1P51610 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HCFC1P51610 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HCFC1P51610 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.65■□□□□ 0.58
HCFC1P51610 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.64■□□□□ 0.58
HCFC1P51610 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms