Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AL162430.1-201ENST00000480705 870 ntBASIC20.65■□□□□ 0.9
RAB28P51157 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.65■□□□□ 0.9
RAB28P51157 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB28P51157 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAB28P51157 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB28P51157 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.64■□□□□ 0.9
RAB28P51157 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.64■□□□□ 0.9
RAB28P51157 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB28P51157 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB28P51157 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB28P51157 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB28P51157 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.64■□□□□ 0.89
RAB28P51157 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB28P51157 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB28P51157 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB28P51157 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB28P51157 EP400NL-214ENST00000641289 2402 ntBASIC20.64■□□□□ 0.89
RAB28P51157 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB28P51157 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB28P51157 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB28P51157 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB28P51157 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RAB28P51157 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
RAB28P51157 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
RAB28P51157 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.63■□□□□ 0.89
RAB28P51157 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RAB28P51157 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB28P51157 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.63■□□□□ 0.89
RAB28P51157 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB28P51157 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RAB28P51157 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RAB28P51157 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RAB28P51157 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB28P51157 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAB28P51157 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB28P51157 AC026471.6-201ENST00000622954 1905 ntBASIC20.63■□□□□ 0.89
RAB28P51157 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.62■□□□□ 0.89
RAB28P51157 AC003102.1-202ENST00000563394 1796 ntBASIC20.62■□□□□ 0.89
RAB28P51157 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RAB28P51157 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB28P51157 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB28P51157 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RAB28P51157 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB28P51157 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB28P51157 KRT18P5-201ENST00000436075 1291 ntBASIC20.62■□□□□ 0.89
RAB28P51157 NTF6G-201ENST00000591094 616 ntBASIC20.62■□□□□ 0.89
RAB28P51157 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB28P51157 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.62■□□□□ 0.89
RAB28P51157 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB28P51157 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB28P51157 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB28P51157 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB28P51157 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RAB28P51157 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB28P51157 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB28P51157 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RAB28P51157 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
RAB28P51157 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RAB28P51157 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB28P51157 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.61■□□□□ 0.89
RAB28P51157 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.61■□□□□ 0.89
RAB28P51157 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RAB28P51157 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 AC004854.2-201ENST00000608450 1441 ntBASIC20.61■□□□□ 0.89
RAB28P51157 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB28P51157 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RAB28P51157 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB28P51157 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB28P51157 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB28P51157 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.6■□□□□ 0.89
RAB28P51157 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.6■□□□□ 0.89
RAB28P51157 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RAB28P51157 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB28P51157 AP004607.4-201ENST00000530158 1459 ntBASIC20.6■□□□□ 0.89
RAB28P51157 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB28P51157 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB28P51157 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB28P51157 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB28P51157 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB28P51157 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB28P51157 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RAB28P51157 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB28P51157 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB28P51157 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB28P51157 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB28P51157 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB28P51157 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.59■□□□□ 0.89
RAB28P51157 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB28P51157 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms