Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5CP51148 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5CP51148 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5CP51148 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB5CP51148 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB5CP51148 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5CP51148 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5CP51148 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5CP51148 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RAB5CP51148 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB5CP51148 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5CP51148 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB5CP51148 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB5CP51148 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RAB5CP51148 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5CP51148 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB5CP51148 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.13■□□□□ 0.33
RAB5CP51148 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5CP51148 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.13■□□□□ 0.33
RAB5CP51148 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5CP51148 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5CP51148 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.13■□□□□ 0.33
RAB5CP51148 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB5CP51148 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5CP51148 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5CP51148 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.13■□□□□ 0.33
RAB5CP51148 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5CP51148 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RAB5CP51148 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAB5CP51148 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RAB5CP51148 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RAB5CP51148 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB5CP51148 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 AC104564.3-201ENST00000582367 638 ntBASIC17.12■□□□□ 0.33
RAB5CP51148 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB5CP51148 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB5CP51148 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB5CP51148 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB5CP51148 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB5CP51148 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB5CP51148 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5CP51148 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB5CP51148 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB5CP51148 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5CP51148 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5CP51148 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
RAB5CP51148 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB5CP51148 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5CP51148 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5CP51148 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB5CP51148 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5CP51148 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5CP51148 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB5CP51148 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RAB5CP51148 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5CP51148 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB5CP51148 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB5CP51148 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB5CP51148 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB5CP51148 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB5CP51148 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB5CP51148 CR559946.2-201ENST00000623684 991 ntBASIC17.1■□□□□ 0.33
RAB5CP51148 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB5CP51148 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB5CP51148 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5CP51148 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB5CP51148 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB5CP51148 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB5CP51148 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5CP51148 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB5CP51148 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms