Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CSNK1EP49674 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1EP49674 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1EP49674 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.01■□□□□ 0.95
CSNK1EP49674 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1EP49674 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.01■□□□□ 0.95
CSNK1EP49674 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.01■□□□□ 0.95
CSNK1EP49674 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1EP49674 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CSNK1EP49674 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21■□□□□ 0.95
CSNK1EP49674 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CSNK1EP49674 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21■□□□□ 0.95
CSNK1EP49674 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21■□□□□ 0.95
CSNK1EP49674 RNA5SP413-201ENST00000516373 109 ntBASIC21■□□□□ 0.95
CSNK1EP49674 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1EP49674 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1EP49674 MARS-234ENST00000630571 216 ntTSL 5 BASIC21■□□□□ 0.95
CSNK1EP49674 MARS-235ENST00000630803 183 ntTSL 3 BASIC21■□□□□ 0.95
CSNK1EP49674 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CSNK1EP49674 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21■□□□□ 0.95
CSNK1EP49674 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1EP49674 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1EP49674 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.99■□□□□ 0.95
CSNK1EP49674 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.99■□□□□ 0.95
CSNK1EP49674 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.99■□□□□ 0.95
CSNK1EP49674 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1EP49674 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.99■□□□□ 0.95
CSNK1EP49674 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1EP49674 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CSNK1EP49674 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.99■□□□□ 0.95
CSNK1EP49674 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1EP49674 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1EP49674 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1EP49674 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CSNK1EP49674 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1EP49674 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.98■□□□□ 0.95
CSNK1EP49674 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1EP49674 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1EP49674 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1EP49674 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.98■□□□□ 0.95
CSNK1EP49674 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1EP49674 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CSNK1EP49674 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.98■□□□□ 0.95
CSNK1EP49674 AC093787.1-201ENST00000450396 207 ntBASIC20.98■□□□□ 0.95
CSNK1EP49674 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.98■□□□□ 0.95
CSNK1EP49674 AC007322.4-201ENST00000509611 723 ntBASIC20.98■□□□□ 0.95
CSNK1EP49674 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1EP49674 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.98■□□□□ 0.95
CSNK1EP49674 AC016405.3-201ENST00000607710 860 ntBASIC20.98■□□□□ 0.95
CSNK1EP49674 OR10C1-204ENST00000622521 1039 ntBASIC20.98■□□□□ 0.95
CSNK1EP49674 AC008694.1-202ENST00000636953 945 ntBASIC20.98■□□□□ 0.95
CSNK1EP49674 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1EP49674 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1EP49674 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1EP49674 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1EP49674 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1EP49674 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.97■□□□□ 0.95
CSNK1EP49674 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CSNK1EP49674 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.97■□□□□ 0.95
CSNK1EP49674 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.97■□□□□ 0.95
CSNK1EP49674 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1EP49674 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1EP49674 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CSNK1EP49674 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1EP49674 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CSNK1EP49674 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CSNK1EP49674 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1EP49674 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.96■□□□□ 0.95
CSNK1EP49674 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1EP49674 POU5F1P3-201ENST00000428824 1078 ntBASIC20.96■□□□□ 0.95
CSNK1EP49674 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CSNK1EP49674 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
CSNK1EP49674 AC008687.6-201ENST00000596318 630 ntBASIC20.96■□□□□ 0.95
CSNK1EP49674 AC069236.1-201ENST00000604339 616 ntBASIC20.96■□□□□ 0.95
CSNK1EP49674 AC120498.10-201ENST00000621827 505 ntBASIC20.96■□□□□ 0.95
CSNK1EP49674 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1EP49674 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.96■□□□□ 0.95
CSNK1EP49674 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CSNK1EP49674 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1EP49674 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.96■□□□□ 0.95
CSNK1EP49674 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CSNK1EP49674 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1EP49674 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CSNK1EP49674 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1EP49674 AC008175.2-201ENST00000612840 297 ntBASIC20.95■□□□□ 0.94
CSNK1EP49674 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.95■□□□□ 0.94
CSNK1EP49674 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1EP49674 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1EP49674 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1EP49674 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1EP49674 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms