Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
CPS1P31327 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC30.59■■■□□ 2.49
CPS1P31327 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
CPS1P31327 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC30.59■■■□□ 2.49
CPS1P31327 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC30.58■■■□□ 2.49
CPS1P31327 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
CPS1P31327 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CPS1P31327 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CPS1P31327 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
CPS1P31327 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC30.57■■■□□ 2.49
CPS1P31327 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.49
CPS1P31327 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC30.57■■■□□ 2.49
CPS1P31327 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC30.57■■■□□ 2.49
CPS1P31327 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC30.57■■■□□ 2.49
CPS1P31327 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC30.57■■■□□ 2.48
CPS1P31327 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC30.57■■■□□ 2.48
CPS1P31327 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CPS1P31327 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC30.57■■■□□ 2.48
CPS1P31327 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CPS1P31327 REXO1L12P-201ENST00000622156 912 ntBASIC30.57■■■□□ 2.48
CPS1P31327 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CPS1P31327 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CPS1P31327 SNORA78-201ENST00000459373 127 ntBASIC30.56■■■□□ 2.48
CPS1P31327 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CPS1P31327 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC30.55■■■□□ 2.48
CPS1P31327 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CPS1P31327 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CPS1P31327 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CPS1P31327 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.55■■■□□ 2.48
CPS1P31327 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.55■■■□□ 2.48
CPS1P31327 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CPS1P31327 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CPS1P31327 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC30.54■■■□□ 2.48
CPS1P31327 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC30.54■■■□□ 2.48
CPS1P31327 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
CPS1P31327 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
CPS1P31327 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CPS1P31327 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.53■■■□□ 2.48
CPS1P31327 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC30.53■■■□□ 2.48
CPS1P31327 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC30.53■■■□□ 2.48
CPS1P31327 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CPS1P31327 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC30.53■■■□□ 2.48
CPS1P31327 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CPS1P31327 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC30.52■■■□□ 2.48
CPS1P31327 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC30.52■■■□□ 2.48
CPS1P31327 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CPS1P31327 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC30.52■■■□□ 2.48
CPS1P31327 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.52■■■□□ 2.48
CPS1P31327 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC30.52■■■□□ 2.48
CPS1P31327 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CPS1P31327 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CPS1P31327 AC055733.4-201ENST00000638462 1354 ntBASIC30.52■■■□□ 2.48
CPS1P31327 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CPS1P31327 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.52■■■□□ 2.48
CPS1P31327 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CPS1P31327 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CPS1P31327 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.51■■■□□ 2.48
CPS1P31327 PXK-203ENST00000383715 1756 ntTSL 5 BASIC30.51■■■□□ 2.47
CPS1P31327 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CPS1P31327 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC30.51■■■□□ 2.47
CPS1P31327 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.5■■■□□ 2.47
CPS1P31327 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC30.5■■■□□ 2.47
CPS1P31327 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC30.5■■■□□ 2.47
CPS1P31327 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC30.5■■■□□ 2.47
CPS1P31327 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC30.5■■■□□ 2.47
CPS1P31327 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC30.5■■■□□ 2.47
CPS1P31327 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CPS1P31327 AC008403.3-201ENST00000598924 454 ntBASIC30.5■■■□□ 2.47
CPS1P31327 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.5■■■□□ 2.47
CPS1P31327 ABCB10P4-201ENST00000566803 2184 ntBASIC30.5■■■□□ 2.47
CPS1P31327 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CPS1P31327 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CPS1P31327 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CPS1P31327 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC30.49■■■□□ 2.47
CPS1P31327 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC30.49■■■□□ 2.47
CPS1P31327 BX088651.1-201ENST00000540551 451 ntBASIC30.49■■■□□ 2.47
CPS1P31327 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC30.49■■■□□ 2.47
CPS1P31327 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
CPS1P31327 FAM197Y4-202ENST00000622692 608 ntBASIC30.49■■■□□ 2.47
CPS1P31327 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms