Protein–RNA interactions for Protein: P28335

HTR2C, 5-hydroxytryptamine receptor 2C, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR2CP28335 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR2CP28335 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 OXCT2P1-201ENST00000447263 1535 ntBASIC18.4■□□□□ 0.54
HTR2CP28335 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR2CP28335 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
HTR2CP28335 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR2CP28335 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.4■□□□□ 0.54
HTR2CP28335 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HTR2CP28335 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HTR2CP28335 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HTR2CP28335 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HTR2CP28335 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.4■□□□□ 0.54
HTR2CP28335 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HTR2CP28335 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
HTR2CP28335 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HTR2CP28335 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.39■□□□□ 0.53
HTR2CP28335 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.39■□□□□ 0.53
HTR2CP28335 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.39■□□□□ 0.53
HTR2CP28335 TSPY9P-201ENST00000440215 945 ntBASIC18.39■□□□□ 0.53
HTR2CP28335 TSPY11P-201ENST00000442607 1045 ntBASIC18.39■□□□□ 0.53
HTR2CP28335 AC068587.7-201ENST00000641602 218 ntBASIC18.39■□□□□ 0.53
HTR2CP28335 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HTR2CP28335 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.39■□□□□ 0.53
HTR2CP28335 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HTR2CP28335 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HTR2CP28335 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HTR2CP28335 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HTR2CP28335 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.38■□□□□ 0.53
HTR2CP28335 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.38■□□□□ 0.53
HTR2CP28335 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HTR2CP28335 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HTR2CP28335 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HTR2CP28335 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
HTR2CP28335 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.37■□□□□ 0.53
HTR2CP28335 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.37■□□□□ 0.53
HTR2CP28335 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.37■□□□□ 0.53
HTR2CP28335 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HTR2CP28335 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
HTR2CP28335 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR2CP28335 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HTR2CP28335 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HTR2CP28335 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
HTR2CP28335 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR2CP28335 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.36■□□□□ 0.53
HTR2CP28335 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR2CP28335 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR2CP28335 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.36■□□□□ 0.53
HTR2CP28335 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HTR2CP28335 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR2CP28335 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTR2CP28335 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.36■□□□□ 0.53
HTR2CP28335 AC239859.2-201ENST00000444165 318 ntBASIC18.36■□□□□ 0.53
HTR2CP28335 AL121603.2-201ENST00000557373 2117 ntBASIC18.36■□□□□ 0.53
HTR2CP28335 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HTR2CP28335 pRNA.6-201ENST00000610482 90 ntBASIC18.36■□□□□ 0.53
HTR2CP28335 pRNA.5-201ENST00000612139 90 ntBASIC18.36■□□□□ 0.53
HTR2CP28335 pRNA.11-201ENST00000618423 90 ntBASIC18.36■□□□□ 0.53
HTR2CP28335 pRNA.13-201ENST00000619112 90 ntBASIC18.36■□□□□ 0.53
HTR2CP28335 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.36■□□□□ 0.53
HTR2CP28335 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HTR2CP28335 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.35■□□□□ 0.53
HTR2CP28335 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HTR2CP28335 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.35■□□□□ 0.53
HTR2CP28335 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.35■□□□□ 0.53
HTR2CP28335 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTR2CP28335 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
HTR2CP28335 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms