Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GDF1P27539 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GDF1P27539 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GDF1P27539 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GDF1P27539 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.36■□□□□ 0.69
GDF1P27539 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.36■□□□□ 0.69
GDF1P27539 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.36■□□□□ 0.69
GDF1P27539 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.36■□□□□ 0.69
GDF1P27539 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.36■□□□□ 0.69
GDF1P27539 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GDF1P27539 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.36■□□□□ 0.69
GDF1P27539 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.36■□□□□ 0.69
GDF1P27539 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.36■□□□□ 0.69
GDF1P27539 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GDF1P27539 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.36■□□□□ 0.69
GDF1P27539 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GDF1P27539 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GDF1P27539 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GDF1P27539 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.36■□□□□ 0.69
GDF1P27539 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.36■□□□□ 0.69
GDF1P27539 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GDF1P27539 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GDF1P27539 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.35■□□□□ 0.69
GDF1P27539 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
GDF1P27539 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.35■□□□□ 0.69
GDF1P27539 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.35■□□□□ 0.69
GDF1P27539 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.35■□□□□ 0.69
GDF1P27539 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GDF1P27539 AC006015.1-201ENST00000429970 570 ntBASIC19.35■□□□□ 0.69
GDF1P27539 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.35■□□□□ 0.69
GDF1P27539 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.35■□□□□ 0.69
GDF1P27539 RARRES2P11-201ENST00000635158 484 ntBASIC19.35■□□□□ 0.69
GDF1P27539 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.35■□□□□ 0.69
GDF1P27539 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GDF1P27539 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GDF1P27539 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.35■□□□□ 0.69
GDF1P27539 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GDF1P27539 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.34■□□□□ 0.69
GDF1P27539 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GDF1P27539 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.34■□□□□ 0.69
GDF1P27539 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
GDF1P27539 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GDF1P27539 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GDF1P27539 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDF1P27539 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GDF1P27539 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GDF1P27539 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GDF1P27539 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.33■□□□□ 0.69
GDF1P27539 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GDF1P27539 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GDF1P27539 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
GDF1P27539 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.33■□□□□ 0.69
GDF1P27539 AC092053.2-201ENST00000640557 1818 ntBASIC19.33■□□□□ 0.69
GDF1P27539 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 KRT18P11-201ENST00000435214 1283 ntBASIC19.33■□□□□ 0.68
GDF1P27539 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.33■□□□□ 0.68
GDF1P27539 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 AC090192.1-201ENST00000517740 490 ntBASIC19.33■□□□□ 0.68
GDF1P27539 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.33■□□□□ 0.68
GDF1P27539 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDF1P27539 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GDF1P27539 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
GDF1P27539 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.32■□□□□ 0.68
GDF1P27539 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.32■□□□□ 0.68
GDF1P27539 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.32■□□□□ 0.68
GDF1P27539 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.32■□□□□ 0.68
GDF1P27539 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.32■□□□□ 0.68
GDF1P27539 AP001160.3-201ENST00000601484 763 ntBASIC19.32■□□□□ 0.68
GDF1P27539 BID-214ENST00000617586 542 ntTSL 5 BASIC19.32■□□□□ 0.68
GDF1P27539 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
GDF1P27539 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDF1P27539 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms