Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 YOL019WYOL019W 1656 nt4.53□□□□□ -1.68
MSH2P25847 PHO5YBR093C 1404 nt4.53□□□□□ -1.68
MSH2P25847 OLE1YGL055W 1533 nt4.52□□□□□ -1.69
MSH2P25847 YFL002W-BYFL002W-B 1317 nt4.52□□□□□ -1.69
MSH2P25847 YGR161W-AYGR161W-A 1317 nt4.52□□□□□ -1.69
MSH2P25847 YBL100W-AYBL100W-A 1317 nt4.52□□□□□ -1.69
MSH2P25847 YCL020WYCL020W 1317 nt4.52□□□□□ -1.69
MSH2P25847 YDL199CYDL199C 2064 nt4.52□□□□□ -1.69
MSH2P25847 NAT1YDL040C 2565 nt4.52□□□□□ -1.69
MSH2P25847 ECM11YDR446W 909 nt4.52□□□□□ -1.69
MSH2P25847 LOC1YFR001W 615 nt4.52□□□□□ -1.69
MSH2P25847 YGL188CYGL188C 174 nt4.52□□□□□ -1.69
MSH2P25847 MTM1YGR257C 1101 nt4.52□□□□□ -1.69
MSH2P25847 RGI2YIL057C 495 nt4.52□□□□□ -1.69
MSH2P25847 IST3YIR005W 447 nt4.52□□□□□ -1.69
MSH2P25847 NNF1YJR112W 606 nt4.52□□□□□ -1.69
MSH2P25847 YKL115CYKL115C 393 nt4.52□□□□□ -1.69
MSH2P25847 CDC42YLR229C 576 nt4.52□□□□□ -1.69
MSH2P25847 YOR283WYOR283W 693 nt4.52□□□□□ -1.69
MSH2P25847 PHO84YML123C 1764 nt4.52□□□□□ -1.69
MSH2P25847 HUL5YGL141W 2733 nt4.52□□□□□ -1.69
MSH2P25847 RRN11YML043C 1524 nt4.51□□□□□ -1.69
MSH2P25847 MRH4YGL064C 1686 nt4.51□□□□□ -1.69
MSH2P25847 YOR022CYOR022C 2148 nt4.51□□□□□ -1.69
MSH2P25847 NHX1YDR456W 1902 nt4.51□□□□□ -1.69
MSH2P25847 YER145C-AYER145C-A 438 nt4.51□□□□□ -1.69
MSH2P25847 SNO3YFL060C 669 nt4.51□□□□□ -1.69
MSH2P25847 YHR214C-DYHR214C-D 294 nt4.51□□□□□ -1.69
MSH2P25847 YJL133C-AYJL133C-A 225 nt4.51□□□□□ -1.69
MSH2P25847 PRP21YJL203W 843 nt4.51□□□□□ -1.69
MSH2P25847 YJR020WYJR020W 333 nt4.51□□□□□ -1.69
MSH2P25847 YKL065W-AYKL065W-A 222 nt4.51□□□□□ -1.69
MSH2P25847 SDS22YKL193C 1017 nt4.51□□□□□ -1.69
MSH2P25847 YAR069CYAR069C 294 nt4.51□□□□□ -1.69
MSH2P25847 BET5YML077W 480 nt4.51□□□□□ -1.69
MSH2P25847 SNO2YNL334C 669 nt4.51□□□□□ -1.69
MSH2P25847 DDP1YOR163W 567 nt4.51□□□□□ -1.69
MSH2P25847 JID1YPR061C 906 nt4.51□□□□□ -1.69
MSH2P25847 YCL022CYCL022C 516 nt4.51□□□□□ -1.69
MSH2P25847 PGS1YCL004W 1566 nt4.51□□□□□ -1.69
MSH2P25847 NUP133YKR082W 3474 nt4.51□□□□□ -1.69
MSH2P25847 YDR170W-AYDR170W-A 1323 nt4.5□□□□□ -1.69
MSH2P25847 YBL005W-AYBL005W-A 1323 nt4.5□□□□□ -1.69
MSH2P25847 YMR046CYMR046C 1323 nt4.5□□□□□ -1.69
MSH2P25847 AIM21YIR003W 2040 nt4.5□□□□□ -1.69
MSH2P25847 GCD1YOR260W 1737 nt4.5□□□□□ -1.69
MSH2P25847 FOX2YKR009C 2703 nt4.5□□□□□ -1.69
MSH2P25847 YPD1YDL235C 504 nt4.5□□□□□ -1.69
MSH2P25847 PPX1YHR201C 1194 nt4.5□□□□□ -1.69
MSH2P25847 ATG27YJL178C 816 nt4.5□□□□□ -1.69
MSH2P25847 RPS4AYJR145C 786 nt4.5□□□□□ -1.69
MSH2P25847 GIM3YNL153C 390 nt4.5□□□□□ -1.69
MSH2P25847 RPL19AYBR084C-A 570 nt4.5□□□□□ -1.69
MSH2P25847 MNN4YKL201C 3537 nt4.5□□□□□ -1.69
MSH2P25847 YML096WYML096W 1578 nt4.49□□□□□ -1.69
MSH2P25847 snR7-SsnR7-S 179 nt4.49□□□□□ -1.69
MSH2P25847 DTD1YDL219W 453 nt4.49□□□□□ -1.69
MSH2P25847 OCA6YDR067C 675 nt4.49□□□□□ -1.69
MSH2P25847 RSM18YER050C 417 nt4.49□□□□□ -1.69
MSH2P25847 TVP38YKR088C 1014 nt4.49□□□□□ -1.69
MSH2P25847 IZH2YOL002C 954 nt4.49□□□□□ -1.69
MSH2P25847 DIB1YPR082C 432 nt4.49□□□□□ -1.69
MSH2P25847 THR4YCR053W 1545 nt4.49□□□□□ -1.69
MSH2P25847 STE24YJR117W 1362 nt4.49□□□□□ -1.69
MSH2P25847 HMG1YML075C 3165 nt4.49□□□□□ -1.69
MSH2P25847 SIN4YNL236W 2925 nt4.49□□□□□ -1.69
MSH2P25847 CRD1YDL142C 852 nt4.48□□□□□ -1.69
MSH2P25847 COBQ0105 1158 nt4.48□□□□□ -1.69
MSH2P25847 SEC4YFL005W 648 nt4.48□□□□□ -1.69
MSH2P25847 SUP56tL(CAA)A 82 nt4.48□□□□□ -1.69
MSH2P25847 SUP53tL(CAA)C 82 nt4.48□□□□□ -1.69
MSH2P25847 tL(CAA)DtL(CAA)D 82 nt4.48□□□□□ -1.69
MSH2P25847 tL(CAA)G1tL(CAA)G1 82 nt4.48□□□□□ -1.69
MSH2P25847 SUP54tL(CAA)G2 82 nt4.48□□□□□ -1.69
MSH2P25847 tL(CAA)G3tL(CAA)G3 82 nt4.48□□□□□ -1.69
MSH2P25847 tL(CAA)KtL(CAA)K 82 nt4.48□□□□□ -1.69
MSH2P25847 tL(CAA)LtL(CAA)L 82 nt4.48□□□□□ -1.69
MSH2P25847 tL(CAA)MtL(CAA)M 82 nt4.48□□□□□ -1.69
MSH2P25847 tL(CAA)NtL(CAA)N 82 nt4.48□□□□□ -1.69
MSH2P25847 MND1YGL183C 660 nt4.48□□□□□ -1.69
MSH2P25847 COG2YGR120C 789 nt4.48□□□□□ -1.69
MSH2P25847 tS(AGA)D3tS(AGA)D3 83 nt4.48□□□□□ -1.69
MSH2P25847 RNR2YJL026W 1200 nt4.48□□□□□ -1.69
MSH2P25847 LSO1YJR005C-A 282 nt4.48□□□□□ -1.69
MSH2P25847 YKR051WYKR051W 1257 nt4.48□□□□□ -1.69
MSH2P25847 ATP11YNL315C 957 nt4.48□□□□□ -1.69
MSH2P25847 YOL029CYOL029C 606 nt4.48□□□□□ -1.69
MSH2P25847 YPR136CYPR136C 513 nt4.48□□□□□ -1.69
MSH2P25847 PHO88YBR106W 567 nt4.48□□□□□ -1.69
MSH2P25847 IMH1YLR309C 2736 nt4.48□□□□□ -1.69
MSH2P25847 SEN1YLR430W 6696 nt4.47□□□□□ -1.69
MSH2P25847 PER1YCR044C 1074 nt4.47□□□□□ -1.69
MSH2P25847 ENT3YJR125C 1227 nt4.47□□□□□ -1.69
MSH2P25847 MBR1YKL093W 1020 nt4.47□□□□□ -1.69
MSH2P25847 ATG10YLL042C 504 nt4.47□□□□□ -1.69
MSH2P25847 FBP1YLR377C 1047 nt4.47□□□□□ -1.69
MSH2P25847 SNF8YPL002C 702 nt4.47□□□□□ -1.69
MSH2P25847 FRM2YCL026C-A 582 nt4.47□□□□□ -1.69
MSH2P25847 NUP85YJR042W 2235 nt4.47□□□□□ -1.69
MSH2P25847 YJL049WYJL049W 1353 nt4.47□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms