Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC026471.6-201ENST00000622954 1905 ntBASIC17.94■□□□□ 0.46
LMO1P25800 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
LMO1P25800 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.93■□□□□ 0.46
LMO1P25800 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.93■□□□□ 0.46
LMO1P25800 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.93■□□□□ 0.46
LMO1P25800 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
LMO1P25800 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.93■□□□□ 0.46
LMO1P25800 SMUG1P1-201ENST00000590640 811 ntBASIC17.93■□□□□ 0.46
LMO1P25800 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.93■□□□□ 0.46
LMO1P25800 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LMO1P25800 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LMO1P25800 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.92■□□□□ 0.46
LMO1P25800 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.92■□□□□ 0.46
LMO1P25800 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.92■□□□□ 0.46
LMO1P25800 AC027682.1-201ENST00000562846 899 ntBASIC17.92■□□□□ 0.46
LMO1P25800 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.92■□□□□ 0.46
LMO1P25800 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.92■□□□□ 0.46
LMO1P25800 AC104564.3-201ENST00000582367 638 ntBASIC17.92■□□□□ 0.46
LMO1P25800 AC110285.6-201ENST00000617652 491 ntBASIC17.92■□□□□ 0.46
LMO1P25800 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.92■□□□□ 0.46
LMO1P25800 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LMO1P25800 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.91■□□□□ 0.46
LMO1P25800 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO1P25800 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO1P25800 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO1P25800 AC092667.1-201ENST00000434301 2586 ntBASIC17.91■□□□□ 0.46
LMO1P25800 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO1P25800 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO1P25800 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.91■□□□□ 0.46
LMO1P25800 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.91■□□□□ 0.46
LMO1P25800 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.91■□□□□ 0.46
LMO1P25800 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.91■□□□□ 0.46
LMO1P25800 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO1P25800 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LMO1P25800 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LMO1P25800 AC008764.7-201ENST00000593779 1081 ntBASIC17.91■□□□□ 0.46
LMO1P25800 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.91■□□□□ 0.46
LMO1P25800 AL355001.2-201ENST00000620617 1191 ntBASIC17.91■□□□□ 0.46
LMO1P25800 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO1P25800 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LMO1P25800 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LMO1P25800 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LMO1P25800 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.9■□□□□ 0.46
LMO1P25800 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LMO1P25800 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO1P25800 AC099791.1-201ENST00000416440 715 ntBASIC17.9■□□□□ 0.46
LMO1P25800 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.9■□□□□ 0.46
LMO1P25800 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.9■□□□□ 0.46
LMO1P25800 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.9■□□□□ 0.46
LMO1P25800 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO1P25800 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO1P25800 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO1P25800 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LMO1P25800 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LMO1P25800 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LMO1P25800 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.89■□□□□ 0.45
LMO1P25800 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LMO1P25800 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO1P25800 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO1P25800 AP001330.3-201ENST00000520123 633 ntBASIC17.89■□□□□ 0.45
LMO1P25800 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LMO1P25800 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO1P25800 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LMO1P25800 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LMO1P25800 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.89■□□□□ 0.45
LMO1P25800 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LMO1P25800 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.88■□□□□ 0.45
LMO1P25800 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LMO1P25800 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.88■□□□□ 0.45
LMO1P25800 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.88■□□□□ 0.45
LMO1P25800 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.88■□□□□ 0.45
LMO1P25800 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LMO1P25800 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LMO1P25800 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms