Protein–RNA interactions for Protein: P21860

ERBB3, Receptor tyrosine-protein kinase erbB-3, humanhuman

Predictions only

Length 1,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3P21860 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ERBB3P21860 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC28.44■■■□□ 2.14
ERBB3P21860 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
ERBB3P21860 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ERBB3P21860 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.44■■■□□ 2.14
ERBB3P21860 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ERBB3P21860 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ERBB3P21860 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
ERBB3P21860 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
ERBB3P21860 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ERBB3P21860 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ERBB3P21860 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
ERBB3P21860 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ERBB3P21860 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC28.43■■■□□ 2.14
ERBB3P21860 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC28.43■■■□□ 2.14
ERBB3P21860 AC069236.1-201ENST00000604339 616 ntBASIC28.43■■■□□ 2.14
ERBB3P21860 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
ERBB3P21860 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC28.42■■■□□ 2.14
ERBB3P21860 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC28.42■■■□□ 2.14
ERBB3P21860 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC28.42■■■□□ 2.14
ERBB3P21860 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC28.42■■■□□ 2.14
ERBB3P21860 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
ERBB3P21860 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ERBB3P21860 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC28.41■■■□□ 2.14
ERBB3P21860 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ERBB3P21860 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ERBB3P21860 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.41■■■□□ 2.14
ERBB3P21860 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
ERBB3P21860 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
ERBB3P21860 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ERBB3P21860 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ERBB3P21860 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC28.41■■■□□ 2.14
ERBB3P21860 RARRES2P4-201ENST00000514074 484 ntBASIC28.41■■■□□ 2.14
ERBB3P21860 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.4■■■□□ 2.14
ERBB3P21860 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ERBB3P21860 KRT18P29-201ENST00000397031 1267 ntBASIC28.4■■■□□ 2.14
ERBB3P21860 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
ERBB3P21860 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ERBB3P21860 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ERBB3P21860 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ERBB3P21860 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC28.4■■■□□ 2.14
ERBB3P21860 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ERBB3P21860 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
ERBB3P21860 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC28.4■■■□□ 2.14
ERBB3P21860 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
ERBB3P21860 AC008694.1-202ENST00000636953 945 ntBASIC28.4■■■□□ 2.14
ERBB3P21860 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
ERBB3P21860 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ERBB3P21860 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.39■■■□□ 2.14
ERBB3P21860 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
ERBB3P21860 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC28.39■■■□□ 2.14
ERBB3P21860 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC28.39■■■□□ 2.14
ERBB3P21860 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ERBB3P21860 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
ERBB3P21860 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC28.39■■■□□ 2.13
ERBB3P21860 AC098590.1-201ENST00000468126 897 ntBASIC28.39■■■□□ 2.13
ERBB3P21860 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC28.39■■■□□ 2.13
ERBB3P21860 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.13
ERBB3P21860 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC28.39■■■□□ 2.13
ERBB3P21860 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ERBB3P21860 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
ERBB3P21860 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
ERBB3P21860 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
ERBB3P21860 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ERBB3P21860 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ERBB3P21860 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC28.38■■■□□ 2.13
ERBB3P21860 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ERBB3P21860 BX276092.2-201ENST00000417668 665 ntBASIC28.38■■■□□ 2.13
ERBB3P21860 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC28.38■■■□□ 2.13
ERBB3P21860 RNF146-206ENST00000480444 843 ntTSL 2 BASIC28.38■■■□□ 2.13
ERBB3P21860 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC28.38■■■□□ 2.13
ERBB3P21860 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC28.38■■■□□ 2.13
ERBB3P21860 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC28.38■■■□□ 2.13
ERBB3P21860 FGF8-207ENST00000618991 856 ntTSL 3 BASIC28.38■■■□□ 2.13
ERBB3P21860 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
ERBB3P21860 AC137767.1-201ENST00000602918 1920 ntBASIC28.37■■■□□ 2.13
ERBB3P21860 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.37■■■□□ 2.13
ERBB3P21860 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ERBB3P21860 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
ERBB3P21860 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ERBB3P21860 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC28.37■■■□□ 2.13
ERBB3P21860 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ERBB3P21860 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ERBB3P21860 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
ERBB3P21860 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
ERBB3P21860 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC28.37■■■□□ 2.13
ERBB3P21860 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC28.37■■■□□ 2.13
ERBB3P21860 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC28.37■■■□□ 2.13
ERBB3P21860 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC28.37■■■□□ 2.13
ERBB3P21860 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ERBB3P21860 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ERBB3P21860 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
ERBB3P21860 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ERBB3P21860 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC28.36■■■□□ 2.13
ERBB3P21860 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ERBB3P21860 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ERBB3P21860 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC28.35■■■□□ 2.13
ERBB3P21860 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC28.35■■■□□ 2.13
ERBB3P21860 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
ERBB3P21860 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms