Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN3P20807 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CAPN3P20807 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CAPN3P20807 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN3P20807 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN3P20807 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CAPN3P20807 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CAPN3P20807 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.49■□□□□ 0.87
CAPN3P20807 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.49■□□□□ 0.87
CAPN3P20807 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.49■□□□□ 0.87
CAPN3P20807 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN3P20807 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN3P20807 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN3P20807 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CAPN3P20807 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN3P20807 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CAPN3P20807 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN3P20807 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN3P20807 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CAPN3P20807 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.48■□□□□ 0.87
CAPN3P20807 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.48■□□□□ 0.87
CAPN3P20807 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CAPN3P20807 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CAPN3P20807 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CAPN3P20807 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN3P20807 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CAPN3P20807 AC133637.1-201ENST00000624115 1537 ntBASIC20.48■□□□□ 0.87
CAPN3P20807 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN3P20807 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CAPN3P20807 OR7E47P-201ENST00000546390 1422 ntBASIC20.47■□□□□ 0.87
CAPN3P20807 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN3P20807 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN3P20807 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN3P20807 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CAPN3P20807 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.47■□□□□ 0.87
CAPN3P20807 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CAPN3P20807 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN3P20807 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN3P20807 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN3P20807 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN3P20807 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN3P20807 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.46■□□□□ 0.87
CAPN3P20807 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.46■□□□□ 0.87
CAPN3P20807 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.46■□□□□ 0.87
CAPN3P20807 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN3P20807 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN3P20807 AC006455.2-201ENST00000429931 906 ntBASIC20.46■□□□□ 0.87
CAPN3P20807 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.46■□□□□ 0.87
CAPN3P20807 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN3P20807 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CAPN3P20807 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN3P20807 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.46■□□□□ 0.87
CAPN3P20807 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN3P20807 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CAPN3P20807 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN3P20807 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN3P20807 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN3P20807 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN3P20807 SUDS3P1-201ENST00000505831 966 ntBASIC20.45■□□□□ 0.86
CAPN3P20807 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.45■□□□□ 0.86
CAPN3P20807 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN3P20807 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN3P20807 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN3P20807 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.45■□□□□ 0.86
CAPN3P20807 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN3P20807 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN3P20807 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.44■□□□□ 0.86
CAPN3P20807 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CAPN3P20807 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.44■□□□□ 0.86
CAPN3P20807 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.44■□□□□ 0.86
CAPN3P20807 AC241377.3-202ENST00000626088 1088 ntBASIC20.44■□□□□ 0.86
CAPN3P20807 AC241585.3-202ENST00000628937 1088 ntBASIC20.44■□□□□ 0.86
CAPN3P20807 AC245100.8-202ENST00000629247 1058 ntBASIC20.44■□□□□ 0.86
CAPN3P20807 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CAPN3P20807 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.44■□□□□ 0.86
CAPN3P20807 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN3P20807 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CAPN3P20807 EDA-201ENST00000338901 1233 ntBASIC20.43■□□□□ 0.86
CAPN3P20807 pRNA.6-201ENST00000610482 90 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms