Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NFKB1P19838 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NFKB1P19838 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.72■■□□□ 1.07
NFKB1P19838 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.72■■□□□ 1.07
NFKB1P19838 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NFKB1P19838 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NFKB1P19838 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NFKB1P19838 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.72■■□□□ 1.07
NFKB1P19838 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.71■■□□□ 1.07
NFKB1P19838 AC003102.1-202ENST00000563394 1796 ntBASIC21.71■■□□□ 1.07
NFKB1P19838 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NFKB1P19838 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.71■■□□□ 1.07
NFKB1P19838 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.71■■□□□ 1.07
NFKB1P19838 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.71■■□□□ 1.07
NFKB1P19838 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.71■■□□□ 1.07
NFKB1P19838 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.71■■□□□ 1.07
NFKB1P19838 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NFKB1P19838 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NFKB1P19838 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NFKB1P19838 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NFKB1P19838 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NFKB1P19838 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NFKB1P19838 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NFKB1P19838 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.7■■□□□ 1.06
NFKB1P19838 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NFKB1P19838 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NFKB1P19838 AC104564.3-201ENST00000582367 638 ntBASIC21.7■■□□□ 1.06
NFKB1P19838 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.7■■□□□ 1.06
NFKB1P19838 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.7■■□□□ 1.06
NFKB1P19838 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.7■■□□□ 1.06
NFKB1P19838 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.7■■□□□ 1.06
NFKB1P19838 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NFKB1P19838 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.69■■□□□ 1.06
NFKB1P19838 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NFKB1P19838 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NFKB1P19838 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NFKB1P19838 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
NFKB1P19838 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NFKB1P19838 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.69■■□□□ 1.06
NFKB1P19838 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.69■■□□□ 1.06
NFKB1P19838 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.69■■□□□ 1.06
NFKB1P19838 AC026310.3-201ENST00000625186 2373 ntBASIC21.69■■□□□ 1.06
NFKB1P19838 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.69■■□□□ 1.06
NFKB1P19838 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NFKB1P19838 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.69■■□□□ 1.06
NFKB1P19838 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NFKB1P19838 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKB1P19838 AC105265.2-201ENST00000467189 838 ntBASIC21.68■■□□□ 1.06
NFKB1P19838 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NFKB1P19838 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKB1P19838 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKB1P19838 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKB1P19838 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.68■■□□□ 1.06
NFKB1P19838 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NFKB1P19838 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NFKB1P19838 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NFKB1P19838 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKB1P19838 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKB1P19838 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKB1P19838 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.67■■□□□ 1.06
NFKB1P19838 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.67■■□□□ 1.06
NFKB1P19838 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKB1P19838 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NFKB1P19838 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NFKB1P19838 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.67■■□□□ 1.06
NFKB1P19838 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.67■■□□□ 1.06
NFKB1P19838 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.67■■□□□ 1.06
NFKB1P19838 Z98882.1-201ENST00000622160 2253 ntBASIC21.67■■□□□ 1.06
NFKB1P19838 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 BX005040.4-201ENST00000637145 1518 ntBASIC21.66■■□□□ 1.06
NFKB1P19838 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.66■■□□□ 1.06
NFKB1P19838 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.66■■□□□ 1.06
NFKB1P19838 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NFKB1P19838 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.66■■□□□ 1.06
NFKB1P19838 AC012414.1-201ENST00000556676 535 ntBASIC21.66■■□□□ 1.06
NFKB1P19838 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.66■■□□□ 1.06
NFKB1P19838 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NFKB1P19838 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NFKB1P19838 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.65■■□□□ 1.06
NFKB1P19838 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NFKB1P19838 AC009237.3-201ENST00000393279 1427 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms