Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
SP9P0CG40 AL591742.1-201ENST00000604433 565 ntBASIC21.34■■□□□ 1.01
SP9P0CG40 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.34■■□□□ 1.01
SP9P0CG40 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP9P0CG40 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SP9P0CG40 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SP9P0CG40 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SP9P0CG40 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP9P0CG40 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.33■■□□□ 1.01
SP9P0CG40 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP9P0CG40 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP9P0CG40 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SP9P0CG40 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP9P0CG40 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP9P0CG40 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.33■■□□□ 1.01
SP9P0CG40 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SP9P0CG40 Z99916.2-201ENST00000604037 246 ntBASIC21.33■■□□□ 1.01
SP9P0CG40 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
SP9P0CG40 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SP9P0CG40 AC120498.10-201ENST00000621827 505 ntBASIC21.33■■□□□ 1.01
SP9P0CG40 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.33■■□□□ 1.01
SP9P0CG40 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP9P0CG40 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.33■■□□□ 1
SP9P0CG40 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.33■■□□□ 1
SP9P0CG40 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.33■■□□□ 1
SP9P0CG40 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SP9P0CG40 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.33■■□□□ 1
SP9P0CG40 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SP9P0CG40 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SP9P0CG40 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.32■■□□□ 1
SP9P0CG40 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SP9P0CG40 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.32■■□□□ 1
SP9P0CG40 SNORA78-201ENST00000459373 127 ntBASIC21.32■■□□□ 1
SP9P0CG40 KRT18P21-201ENST00000515767 1272 ntBASIC21.32■■□□□ 1
SP9P0CG40 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.32■■□□□ 1
SP9P0CG40 AC079089.2-201ENST00000531211 1277 ntBASIC21.32■■□□□ 1
SP9P0CG40 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SP9P0CG40 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SP9P0CG40 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.32■■□□□ 1
SP9P0CG40 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SP9P0CG40 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.31■■□□□ 1
SP9P0CG40 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SP9P0CG40 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SP9P0CG40 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SP9P0CG40 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SP9P0CG40 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SP9P0CG40 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.31■■□□□ 1
SP9P0CG40 LSM12P1-201ENST00000411836 588 ntBASIC21.31■■□□□ 1
SP9P0CG40 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.31■■□□□ 1
SP9P0CG40 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.31■■□□□ 1
SP9P0CG40 C1QBPP2-201ENST00000528754 825 ntBASIC21.31■■□□□ 1
SP9P0CG40 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.31■■□□□ 1
SP9P0CG40 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.31■■□□□ 1
SP9P0CG40 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.31■■□□□ 1
SP9P0CG40 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.31■■□□□ 1
SP9P0CG40 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
SP9P0CG40 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SP9P0CG40 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.3■■□□□ 1
SP9P0CG40 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.3■■□□□ 1
SP9P0CG40 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SP9P0CG40 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.3■■□□□ 1
SP9P0CG40 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.3■■□□□ 1
SP9P0CG40 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SP9P0CG40 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.3■■□□□ 1
SP9P0CG40 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
SP9P0CG40 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SP9P0CG40 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SP9P0CG40 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.3■■□□□ 1
SP9P0CG40 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
SP9P0CG40 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.29■■□□□ 1
SP9P0CG40 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.29■■□□□ 1
SP9P0CG40 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.29■■□□□ 1
SP9P0CG40 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.29■■□□□ 1
SP9P0CG40 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SP9P0CG40 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SP9P0CG40 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SP9P0CG40 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.29■■□□□ 1
SP9P0CG40 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.29■■□□□ 1
SP9P0CG40 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.29■■□□□ 1
SP9P0CG40 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.29■■□□□ 1
SP9P0CG40 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.29■■□□□ 1
SP9P0CG40 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SP9P0CG40 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.29■■□□□ 1
SP9P0CG40 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
SP9P0CG40 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.29■■□□□ 1
SP9P0CG40 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SP9P0CG40 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 CYP2T3P-201ENST00000601990 817 ntBASIC21.28■■□□□ 1
SP9P0CG40 AC008175.2-201ENST00000612840 297 ntBASIC21.28■■□□□ 1
SP9P0CG40 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SP9P0CG40 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SP9P0CG40 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SP9P0CG40 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms