Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GKN3PP0CG01 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GKN3PP0CG01 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GKN3PP0CG01 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GKN3PP0CG01 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GKN3PP0CG01 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
GKN3PP0CG01 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
GKN3PP0CG01 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.63■□□□□ 0.73
GKN3PP0CG01 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.63■□□□□ 0.73
GKN3PP0CG01 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.63■□□□□ 0.73
GKN3PP0CG01 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.63■□□□□ 0.73
GKN3PP0CG01 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.63■□□□□ 0.73
GKN3PP0CG01 AC106739.1-201ENST00000617035 715 ntBASIC19.63■□□□□ 0.73
GKN3PP0CG01 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GKN3PP0CG01 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.63■□□□□ 0.73
GKN3PP0CG01 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GKN3PP0CG01 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GKN3PP0CG01 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.62■□□□□ 0.73
GKN3PP0CG01 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GKN3PP0CG01 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GKN3PP0CG01 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GKN3PP0CG01 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GKN3PP0CG01 AC099791.1-201ENST00000416440 715 ntBASIC19.62■□□□□ 0.73
GKN3PP0CG01 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.62■□□□□ 0.73
GKN3PP0CG01 AC133561.4-201ENST00000566112 224 ntBASIC19.62■□□□□ 0.73
GKN3PP0CG01 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.62■□□□□ 0.73
GKN3PP0CG01 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GKN3PP0CG01 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.62■□□□□ 0.73
GKN3PP0CG01 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.62■□□□□ 0.73
GKN3PP0CG01 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
GKN3PP0CG01 Z98882.1-201ENST00000622160 2253 ntBASIC19.62■□□□□ 0.73
GKN3PP0CG01 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GKN3PP0CG01 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.61■□□□□ 0.73
GKN3PP0CG01 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GKN3PP0CG01 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GKN3PP0CG01 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GKN3PP0CG01 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GKN3PP0CG01 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
GKN3PP0CG01 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GKN3PP0CG01 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 AL034346.1-201ENST00000568244 1277 ntBASIC19.6■□□□□ 0.73
GKN3PP0CG01 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GKN3PP0CG01 SMUG1P1-201ENST00000590640 811 ntBASIC19.6■□□□□ 0.73
GKN3PP0CG01 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 AC005229.4-201ENST00000610085 2198 ntBASIC19.6■□□□□ 0.73
GKN3PP0CG01 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.6■□□□□ 0.73
GKN3PP0CG01 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GKN3PP0CG01 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GKN3PP0CG01 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GKN3PP0CG01 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.59■□□□□ 0.73
GKN3PP0CG01 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.59■□□□□ 0.73
GKN3PP0CG01 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
GKN3PP0CG01 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.59■□□□□ 0.73
GKN3PP0CG01 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GKN3PP0CG01 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GKN3PP0CG01 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.59■□□□□ 0.73
GKN3PP0CG01 IGHV3-19-201ENST00000521488 291 ntBASIC19.59■□□□□ 0.73
GKN3PP0CG01 AC104564.3-201ENST00000582367 638 ntBASIC19.59■□□□□ 0.73
GKN3PP0CG01 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GKN3PP0CG01 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GKN3PP0CG01 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GKN3PP0CG01 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
GKN3PP0CG01 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms