Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
THBS1P07996 AP006587.3-201ENST00000525742 1516 ntBASIC19.65■□□□□ 0.74
THBS1P07996 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS1P07996 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS1P07996 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
THBS1P07996 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
THBS1P07996 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
THBS1P07996 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.64■□□□□ 0.73
THBS1P07996 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.64■□□□□ 0.73
THBS1P07996 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.64■□□□□ 0.73
THBS1P07996 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.64■□□□□ 0.73
THBS1P07996 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
THBS1P07996 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.64■□□□□ 0.73
THBS1P07996 AC003102.1-202ENST00000563394 1796 ntBASIC19.64■□□□□ 0.73
THBS1P07996 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
THBS1P07996 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.64■□□□□ 0.73
THBS1P07996 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
THBS1P07996 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.64■□□□□ 0.73
THBS1P07996 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.64■□□□□ 0.73
THBS1P07996 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
THBS1P07996 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
THBS1P07996 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.63■□□□□ 0.73
THBS1P07996 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.63■□□□□ 0.73
THBS1P07996 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.63■□□□□ 0.73
THBS1P07996 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
THBS1P07996 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
THBS1P07996 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
THBS1P07996 AC027682.1-201ENST00000562846 899 ntBASIC19.63■□□□□ 0.73
THBS1P07996 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.63■□□□□ 0.73
THBS1P07996 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.63■□□□□ 0.73
THBS1P07996 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.63■□□□□ 0.73
THBS1P07996 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THBS1P07996 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THBS1P07996 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THBS1P07996 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THBS1P07996 SUDS3P1-201ENST00000505831 966 ntBASIC19.62■□□□□ 0.73
THBS1P07996 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
THBS1P07996 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
THBS1P07996 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
THBS1P07996 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.62■□□□□ 0.73
THBS1P07996 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THBS1P07996 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THBS1P07996 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.61■□□□□ 0.73
THBS1P07996 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 EDA-201ENST00000338901 1233 ntBASIC19.61■□□□□ 0.73
THBS1P07996 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
THBS1P07996 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 PBX2P1-201ENST00000493219 1291 ntBASIC19.61■□□□□ 0.73
THBS1P07996 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.61■□□□□ 0.73
THBS1P07996 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
THBS1P07996 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THBS1P07996 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.61■□□□□ 0.73
THBS1P07996 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
THBS1P07996 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
THBS1P07996 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.6■□□□□ 0.73
THBS1P07996 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
THBS1P07996 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.6■□□□□ 0.73
THBS1P07996 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
THBS1P07996 AC099791.1-201ENST00000416440 715 ntBASIC19.6■□□□□ 0.73
THBS1P07996 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
THBS1P07996 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
THBS1P07996 AC008764.7-201ENST00000593779 1081 ntBASIC19.6■□□□□ 0.73
THBS1P07996 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THBS1P07996 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.6■□□□□ 0.73
THBS1P07996 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.6■□□□□ 0.73
THBS1P07996 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.6■□□□□ 0.73
THBS1P07996 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
THBS1P07996 FEM1AP4-201ENST00000443167 1987 ntBASIC19.59■□□□□ 0.73
THBS1P07996 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.59■□□□□ 0.73
THBS1P07996 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
THBS1P07996 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.59■□□□□ 0.73
THBS1P07996 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.59■□□□□ 0.73
THBS1P07996 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.59■□□□□ 0.73
THBS1P07996 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.59■□□□□ 0.73
THBS1P07996 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.59■□□□□ 0.73
THBS1P07996 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS1P07996 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS1P07996 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS1P07996 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS1P07996 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.59■□□□□ 0.73
THBS1P07996 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
THBS1P07996 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THBS1P07996 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
THBS1P07996 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THBS1P07996 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms