Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
APPP05067 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
APPP05067 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.58■■□□□ 1.69
APPP05067 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
APPP05067 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
APPP05067 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.58■■□□□ 1.69
APPP05067 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
APPP05067 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.58■■□□□ 1.69
APPP05067 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
APPP05067 AL117328.2-201ENST00000624617 1940 ntBASIC25.58■■□□□ 1.69
APPP05067 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
APPP05067 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
APPP05067 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.58■■□□□ 1.68
APPP05067 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.57■■□□□ 1.68
APPP05067 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.57■■□□□ 1.68
APPP05067 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.57■■□□□ 1.68
APPP05067 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
APPP05067 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.57■■□□□ 1.68
APPP05067 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
APPP05067 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.57■■□□□ 1.68
APPP05067 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
APPP05067 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.57■■□□□ 1.68
APPP05067 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
APPP05067 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
APPP05067 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
APPP05067 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
APPP05067 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
APPP05067 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
APPP05067 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
APPP05067 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
APPP05067 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
APPP05067 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
APPP05067 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.55■■□□□ 1.68
APPP05067 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
APPP05067 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
APPP05067 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
APPP05067 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.55■■□□□ 1.68
APPP05067 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.55■■□□□ 1.68
APPP05067 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.55■■□□□ 1.68
APPP05067 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
APPP05067 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
APPP05067 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.55■■□□□ 1.68
APPP05067 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
APPP05067 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
APPP05067 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
APPP05067 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.54■■□□□ 1.68
APPP05067 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.54■■□□□ 1.68
APPP05067 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
APPP05067 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
APPP05067 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
APPP05067 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
APPP05067 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
APPP05067 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
APPP05067 ECEL1P1-201ENST00000373592 1742 ntBASIC25.54■■□□□ 1.68
APPP05067 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
APPP05067 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
APPP05067 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.53■■□□□ 1.68
APPP05067 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
APPP05067 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.53■■□□□ 1.68
APPP05067 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
APPP05067 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.53■■□□□ 1.68
APPP05067 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.53■■□□□ 1.68
APPP05067 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.53■■□□□ 1.68
APPP05067 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
APPP05067 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.53■■□□□ 1.68
APPP05067 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
APPP05067 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.53■■□□□ 1.68
APPP05067 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.53■■□□□ 1.68
APPP05067 AC004854.2-201ENST00000608450 1441 ntBASIC25.53■■□□□ 1.68
APPP05067 FAM99A-202ENST00000538190 1989 ntBASIC25.53■■□□□ 1.68
APPP05067 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.52■■□□□ 1.68
APPP05067 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
APPP05067 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
APPP05067 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
APPP05067 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
APPP05067 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
APPP05067 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.52■■□□□ 1.68
APPP05067 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
APPP05067 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.52■■□□□ 1.68
APPP05067 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.52■■□□□ 1.68
APPP05067 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.52■■□□□ 1.68
APPP05067 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
APPP05067 AC026471.6-201ENST00000622954 1905 ntBASIC25.52■■□□□ 1.68
APPP05067 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
APPP05067 AP004607.4-201ENST00000530158 1459 ntBASIC25.52■■□□□ 1.68
APPP05067 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
APPP05067 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
APPP05067 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
APPP05067 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
APPP05067 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
APPP05067 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms