Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6AP02538 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6AP02538 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KRT6AP02538 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KRT6AP02538 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.63■□□□□ 0.89
KRT6AP02538 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRT6AP02538 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.63■□□□□ 0.89
KRT6AP02538 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT6AP02538 AC131212.1-201ENST00000613771 668 ntBASIC20.63■□□□□ 0.89
KRT6AP02538 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT6AP02538 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.63■□□□□ 0.89
KRT6AP02538 AP004607.7-201ENST00000527152 1677 ntBASIC20.63■□□□□ 0.89
KRT6AP02538 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.63■□□□□ 0.89
KRT6AP02538 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KRT6AP02538 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT6AP02538 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KRT6AP02538 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6AP02538 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KRT6AP02538 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6AP02538 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KRT6AP02538 UNC93B3-201ENST00000308076 687 ntBASIC20.62■□□□□ 0.89
KRT6AP02538 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6AP02538 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KRT6AP02538 BX842568.3-201ENST00000418104 571 ntBASIC20.62■□□□□ 0.89
KRT6AP02538 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.62■□□□□ 0.89
KRT6AP02538 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6AP02538 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
KRT6AP02538 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6AP02538 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.62■□□□□ 0.89
KRT6AP02538 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6AP02538 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KRT6AP02538 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT6AP02538 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT6AP02538 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6AP02538 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6AP02538 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6AP02538 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT6AP02538 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.61■□□□□ 0.89
KRT6AP02538 MIR4767-201ENST00000582827 78 ntBASIC20.61■□□□□ 0.89
KRT6AP02538 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6AP02538 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT6AP02538 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6AP02538 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6AP02538 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.61■□□□□ 0.89
KRT6AP02538 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6AP02538 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
KRT6AP02538 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KRT6AP02538 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
KRT6AP02538 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT6AP02538 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6AP02538 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT6AP02538 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6AP02538 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT6AP02538 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6AP02538 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT6AP02538 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
KRT6AP02538 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.6■□□□□ 0.89
KRT6AP02538 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
KRT6AP02538 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KRT6AP02538 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KRT6AP02538 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6AP02538 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6AP02538 AL121603.2-201ENST00000557373 2117 ntBASIC20.6■□□□□ 0.89
KRT6AP02538 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.6■□□□□ 0.89
KRT6AP02538 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.6■□□□□ 0.89
KRT6AP02538 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KRT6AP02538 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KRT6AP02538 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.59■□□□□ 0.89
KRT6AP02538 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6AP02538 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6AP02538 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6AP02538 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6AP02538 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
KRT6AP02538 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6AP02538 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6AP02538 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.59■□□□□ 0.89
KRT6AP02538 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT6AP02538 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6AP02538 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRT6AP02538 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.59■□□□□ 0.89
KRT6AP02538 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6AP02538 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
KRT6AP02538 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6AP02538 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6AP02538 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6AP02538 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.58■□□□□ 0.89
KRT6AP02538 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.58■□□□□ 0.89
KRT6AP02538 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.58■□□□□ 0.89
KRT6AP02538 AC233992.3-201ENST00000607491 485 ntBASIC20.58■□□□□ 0.89
KRT6AP02538 AL136162.1-201ENST00000607711 1078 ntBASIC20.58■□□□□ 0.89
KRT6AP02538 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRT6AP02538 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
KRT6AP02538 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRT6AP02538 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
KRT6AP02538 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.58■□□□□ 0.88
KRT6AP02538 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.58■□□□□ 0.88
KRT6AP02538 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.58■□□□□ 0.88
KRT6AP02538 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRT6AP02538 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.58■□□□□ 0.88
KRT6AP02538 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms