Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC009831.1-201ENST00000580420 1582 ntBASIC16.01■□□□□ 0.15
HLA-DQA1P01909 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 AC026202.3-201ENST00000600805 1127 ntBASIC16.01■□□□□ 0.15
HLA-DQA1P01909 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HLA-DQA1P01909 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HLA-DQA1P01909 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HLA-DQA1P01909 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DQA1P01909 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DQA1P01909 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16■□□□□ 0.15
HLA-DQA1P01909 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16■□□□□ 0.15
HLA-DQA1P01909 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HLA-DQA1P01909 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HLA-DQA1P01909 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HLA-DQA1P01909 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16■□□□□ 0.15
HLA-DQA1P01909 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
HLA-DQA1P01909 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HLA-DQA1P01909 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 RAP2CP1-202ENST00000605179 643 ntBASIC15.99■□□□□ 0.15
HLA-DQA1P01909 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HLA-DQA1P01909 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 ABHD17AP5-201ENST00000580133 923 ntBASIC15.98■□□□□ 0.15
HLA-DQA1P01909 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQA1P01909 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 AC087289.5-201ENST00000586076 3175 ntBASIC15.97■□□□□ 0.15
HLA-DQA1P01909 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HLA-DQA1P01909 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA1P01909 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms