Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TGFAP01135 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TGFAP01135 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TGFAP01135 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TGFAP01135 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.58■□□□□ 0.4
TGFAP01135 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TGFAP01135 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TGFAP01135 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.57■□□□□ 0.4
TGFAP01135 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TGFAP01135 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TGFAP01135 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TGFAP01135 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.57■□□□□ 0.4
TGFAP01135 AC073210.2-201ENST00000430369 194 ntBASIC17.57■□□□□ 0.4
TGFAP01135 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TGFAP01135 MIR4758-201ENST00000577688 71 ntBASIC17.57■□□□□ 0.4
TGFAP01135 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TGFAP01135 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TGFAP01135 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TGFAP01135 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TGFAP01135 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TGFAP01135 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.57■□□□□ 0.4
TGFAP01135 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.57■□□□□ 0.4
TGFAP01135 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TGFAP01135 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.57■□□□□ 0.4
TGFAP01135 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
TGFAP01135 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.56■□□□□ 0.4
TGFAP01135 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.56■□□□□ 0.4
TGFAP01135 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TGFAP01135 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.56■□□□□ 0.4
TGFAP01135 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TGFAP01135 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.56■□□□□ 0.4
TGFAP01135 SLC7A5P1-201ENST00000568957 537 ntBASIC17.56■□□□□ 0.4
TGFAP01135 AC008694.1-202ENST00000636953 945 ntBASIC17.56■□□□□ 0.4
TGFAP01135 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.56■□□□□ 0.4
TGFAP01135 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.56■□□□□ 0.4
TGFAP01135 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
TGFAP01135 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TGFAP01135 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TGFAP01135 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.55■□□□□ 0.4
TGFAP01135 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TGFAP01135 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.55■□□□□ 0.4
TGFAP01135 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TGFAP01135 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TGFAP01135 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TGFAP01135 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TGFAP01135 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
TGFAP01135 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.55■□□□□ 0.4
TGFAP01135 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TGFAP01135 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TGFAP01135 AC120498.10-201ENST00000621827 505 ntBASIC17.55■□□□□ 0.4
TGFAP01135 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TGFAP01135 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.55■□□□□ 0.4
TGFAP01135 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.55■□□□□ 0.4
TGFAP01135 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.55■□□□□ 0.4
TGFAP01135 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 LINC00526-201ENST00000581067 1875 ntBASIC17.54■□□□□ 0.4
TGFAP01135 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.54■□□□□ 0.4
TGFAP01135 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 MKRN4P-201ENST00000444706 1521 ntBASIC17.54■□□□□ 0.4
TGFAP01135 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.54■□□□□ 0.4
TGFAP01135 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.54■□□□□ 0.4
TGFAP01135 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.54■□□□□ 0.4
TGFAP01135 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.54■□□□□ 0.4
TGFAP01135 EEF1DP3-203ENST00000566025 782 ntBASIC17.54■□□□□ 0.4
TGFAP01135 AC053503.5-201ENST00000601508 636 ntBASIC17.54■□□□□ 0.4
TGFAP01135 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.54■□□□□ 0.4
TGFAP01135 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.54■□□□□ 0.4
TGFAP01135 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TGFAP01135 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.54■□□□□ 0.4
TGFAP01135 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TGFAP01135 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TGFAP01135 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TGFAP01135 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms