Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.15■□□□□ 0.98
CBX6O95503 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.15■□□□□ 0.98
CBX6O95503 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.15■□□□□ 0.98
CBX6O95503 AL136162.1-201ENST00000607711 1078 ntBASIC21.15■□□□□ 0.98
CBX6O95503 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.15■□□□□ 0.98
CBX6O95503 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CBX6O95503 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CBX6O95503 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.14■□□□□ 0.98
CBX6O95503 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CBX6O95503 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CBX6O95503 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CBX6O95503 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CBX6O95503 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CBX6O95503 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CBX6O95503 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CBX6O95503 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.14■□□□□ 0.97
CBX6O95503 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.14■□□□□ 0.97
CBX6O95503 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CBX6O95503 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.14■□□□□ 0.97
CBX6O95503 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.14■□□□□ 0.97
CBX6O95503 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.14■□□□□ 0.97
CBX6O95503 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CBX6O95503 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CBX6O95503 AC007952.6-201ENST00000573168 2673 ntBASIC21.14■□□□□ 0.97
CBX6O95503 AC003957.1-201ENST00000625108 2673 ntBASIC21.14■□□□□ 0.97
CBX6O95503 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CBX6O95503 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.14■□□□□ 0.97
CBX6O95503 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CBX6O95503 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CBX6O95503 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CBX6O95503 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CBX6O95503 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.13■□□□□ 0.97
CBX6O95503 AC104564.3-201ENST00000582367 638 ntBASIC21.13■□□□□ 0.97
CBX6O95503 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.13■□□□□ 0.97
CBX6O95503 MIR5787-201ENST00000611784 55 ntBASIC21.13■□□□□ 0.97
CBX6O95503 MIR6722-201ENST00000617286 78 ntBASIC21.13■□□□□ 0.97
CBX6O95503 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.13■□□□□ 0.97
CBX6O95503 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.13■□□□□ 0.97
CBX6O95503 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CBX6O95503 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBX6O95503 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBX6O95503 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CBX6O95503 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBX6O95503 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBX6O95503 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CBX6O95503 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBX6O95503 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CBX6O95503 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBX6O95503 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.12■□□□□ 0.97
CBX6O95503 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CBX6O95503 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CBX6O95503 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CBX6O95503 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CBX6O95503 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.11■□□□□ 0.97
CBX6O95503 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 EDA-201ENST00000338901 1233 ntBASIC21.11■□□□□ 0.97
CBX6O95503 SNX5-217ENST00000606557 1087 ntBASIC21.11■□□□□ 0.97
CBX6O95503 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CBX6O95503 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.11■□□□□ 0.97
CBX6O95503 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.11■□□□□ 0.97
CBX6O95503 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CBX6O95503 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CBX6O95503 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX6O95503 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX6O95503 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CBX6O95503 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.1■□□□□ 0.97
CBX6O95503 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX6O95503 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CBX6O95503 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
CBX6O95503 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.1■□□□□ 0.97
CBX6O95503 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.1■□□□□ 0.97
CBX6O95503 AL355001.2-201ENST00000620617 1191 ntBASIC21.1■□□□□ 0.97
CBX6O95503 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms