Protein–RNA interactions for Protein: O75452

RDH16, Retinol dehydrogenase 16, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16O75452 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.22■□□□□ 0.83
RDH16O75452 KRT18P5-201ENST00000436075 1291 ntBASIC20.22■□□□□ 0.83
RDH16O75452 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RDH16O75452 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RDH16O75452 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RDH16O75452 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RDH16O75452 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RDH16O75452 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.21■□□□□ 0.83
RDH16O75452 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.21■□□□□ 0.83
RDH16O75452 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.21■□□□□ 0.83
RDH16O75452 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RDH16O75452 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RDH16O75452 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
RDH16O75452 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH16O75452 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RDH16O75452 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.21■□□□□ 0.83
RDH16O75452 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.21■□□□□ 0.83
RDH16O75452 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.21■□□□□ 0.83
RDH16O75452 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.21■□□□□ 0.83
RDH16O75452 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.21■□□□□ 0.83
RDH16O75452 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.21■□□□□ 0.83
RDH16O75452 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RDH16O75452 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH16O75452 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH16O75452 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH16O75452 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RDH16O75452 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 AC026471.6-201ENST00000622954 1905 ntBASIC20.2■□□□□ 0.82
RDH16O75452 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RDH16O75452 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.2■□□□□ 0.82
RDH16O75452 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.2■□□□□ 0.82
RDH16O75452 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.2■□□□□ 0.82
RDH16O75452 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 NTF6G-201ENST00000591094 616 ntBASIC20.2■□□□□ 0.82
RDH16O75452 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RDH16O75452 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RDH16O75452 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RDH16O75452 EP400NL-214ENST00000641289 2402 ntBASIC20.19■□□□□ 0.82
RDH16O75452 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.19■□□□□ 0.82
RDH16O75452 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.19■□□□□ 0.82
RDH16O75452 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.19■□□□□ 0.82
RDH16O75452 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.19■□□□□ 0.82
RDH16O75452 KRT18P61-201ENST00000585825 1298 ntBASIC20.19■□□□□ 0.82
RDH16O75452 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RDH16O75452 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH16O75452 AC004854.2-201ENST00000608450 1441 ntBASIC20.19■□□□□ 0.82
RDH16O75452 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH16O75452 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RDH16O75452 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.18■□□□□ 0.82
RDH16O75452 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.18■□□□□ 0.82
RDH16O75452 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH16O75452 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH16O75452 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RDH16O75452 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH16O75452 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.18■□□□□ 0.82
RDH16O75452 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH16O75452 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
RDH16O75452 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.18■□□□□ 0.82
RDH16O75452 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.18■□□□□ 0.82
RDH16O75452 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.18■□□□□ 0.82
RDH16O75452 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH16O75452 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH16O75452 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH16O75452 KRT87P-202ENST00000534226 1464 ntBASIC20.18■□□□□ 0.82
RDH16O75452 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH16O75452 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.17■□□□□ 0.82
RDH16O75452 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RDH16O75452 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.17■□□□□ 0.82
RDH16O75452 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.17■□□□□ 0.82
RDH16O75452 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.17■□□□□ 0.82
RDH16O75452 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.17■□□□□ 0.82
RDH16O75452 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RDH16O75452 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RDH16O75452 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RDH16O75452 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms