Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTCD1O75127 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
PTCD1O75127 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PTCD1O75127 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
PTCD1O75127 MIPEPP3-201ENST00000412105 444 ntBASIC27.54■■■□□ 2
PTCD1O75127 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC27.54■■■□□ 2
PTCD1O75127 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.54■■■□□ 2
PTCD1O75127 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.54■■■□□ 2
PTCD1O75127 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
PTCD1O75127 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
PTCD1O75127 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
PTCD1O75127 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PTCD1O75127 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
PTCD1O75127 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC27.53■■■□□ 2
PTCD1O75127 MIR4758-201ENST00000577688 71 ntBASIC27.53■■■□□ 2
PTCD1O75127 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27.53■■■□□ 2
PTCD1O75127 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.53■■■□□ 2
PTCD1O75127 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.53■■■□□ 2
PTCD1O75127 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
PTCD1O75127 MKRN4P-201ENST00000444706 1521 ntBASIC27.52■■■□□ 2
PTCD1O75127 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PTCD1O75127 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
PTCD1O75127 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC27.52■■■□□ 2
PTCD1O75127 AC093787.1-201ENST00000450396 207 ntBASIC27.52■■■□□ 2
PTCD1O75127 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.52■■■□□ 2
PTCD1O75127 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.52■■■□□ 2
PTCD1O75127 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
PTCD1O75127 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.51■■■□□ 2
PTCD1O75127 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCD1O75127 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.51■■□□□ 1.99
PTCD1O75127 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCD1O75127 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PTCD1O75127 AC016405.3-201ENST00000607710 860 ntBASIC27.51■■□□□ 1.99
PTCD1O75127 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCD1O75127 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC27.51■■□□□ 1.99
PTCD1O75127 AC137767.1-201ENST00000602918 1920 ntBASIC27.51■■□□□ 1.99
PTCD1O75127 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PTCD1O75127 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
PTCD1O75127 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCD1O75127 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.51■■□□□ 1.99
PTCD1O75127 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTCD1O75127 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTCD1O75127 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PTCD1O75127 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.5■■□□□ 1.99
PTCD1O75127 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.5■■□□□ 1.99
PTCD1O75127 RNA5SP413-201ENST00000516373 109 ntBASIC27.5■■□□□ 1.99
PTCD1O75127 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTCD1O75127 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.5■■□□□ 1.99
PTCD1O75127 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTCD1O75127 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.49■■□□□ 1.99
PTCD1O75127 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC27.49■■□□□ 1.99
PTCD1O75127 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.49■■□□□ 1.99
PTCD1O75127 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC27.49■■□□□ 1.99
PTCD1O75127 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.49■■□□□ 1.99
PTCD1O75127 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.49■■□□□ 1.99
PTCD1O75127 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.49■■□□□ 1.99
PTCD1O75127 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.49■■□□□ 1.99
PTCD1O75127 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
PTCD1O75127 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PTCD1O75127 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD1O75127 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD1O75127 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD1O75127 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.48■■□□□ 1.99
PTCD1O75127 AC007322.4-201ENST00000509611 723 ntBASIC27.48■■□□□ 1.99
PTCD1O75127 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD1O75127 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD1O75127 AC008687.6-201ENST00000596318 630 ntBASIC27.48■■□□□ 1.99
PTCD1O75127 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD1O75127 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
PTCD1O75127 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCD1O75127 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCD1O75127 AC087742.1-201ENST00000575880 1738 ntBASIC27.47■■□□□ 1.99
PTCD1O75127 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PTCD1O75127 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.47■■□□□ 1.99
PTCD1O75127 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
PTCD1O75127 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.47■■□□□ 1.99
PTCD1O75127 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCD1O75127 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCD1O75127 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCD1O75127 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCD1O75127 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.47■■□□□ 1.99
PTCD1O75127 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
PTCD1O75127 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PTCD1O75127 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PTCD1O75127 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
PTCD1O75127 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.46■■□□□ 1.99
PTCD1O75127 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.46■■□□□ 1.99
PTCD1O75127 OR10C1-204ENST00000622521 1039 ntBASIC27.46■■□□□ 1.99
PTCD1O75127 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PTCD1O75127 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PTCD1O75127 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PTCD1O75127 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms