Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.03■□□□□ 0.8
CTNSO60931 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNSO60931 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNSO60931 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNSO60931 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CTNSO60931 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.03■□□□□ 0.8
CTNSO60931 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.03■□□□□ 0.8
CTNSO60931 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CTNSO60931 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTNSO60931 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.03■□□□□ 0.8
CTNSO60931 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CTNSO60931 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.02■□□□□ 0.8
CTNSO60931 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNSO60931 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNSO60931 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNSO60931 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNSO60931 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.02■□□□□ 0.8
CTNSO60931 AC079140.4-201ENST00000507448 529 ntBASIC20.02■□□□□ 0.8
CTNSO60931 DUX4L2-201ENST00000561772 1275 ntBASIC20.02■□□□□ 0.8
CTNSO60931 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.02■□□□□ 0.8
CTNSO60931 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CTNSO60931 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
CTNSO60931 DUX4L6-201ENST00000626483 1275 ntBASIC20.02■□□□□ 0.8
CTNSO60931 DUX4L1-201ENST00000627662 1275 ntBASIC20.02■□□□□ 0.8
CTNSO60931 DUX4L8-201ENST00000629013 1275 ntBASIC20.02■□□□□ 0.8
CTNSO60931 DUX4L3-201ENST00000630187 1275 ntBASIC20.02■□□□□ 0.8
CTNSO60931 DUX4L7-201ENST00000630678 1275 ntBASIC20.02■□□□□ 0.8
CTNSO60931 DUX4L5-201ENST00000630834 1275 ntBASIC20.02■□□□□ 0.8
CTNSO60931 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNSO60931 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CTNSO60931 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTNSO60931 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTNSO60931 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CTNSO60931 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.02■□□□□ 0.79
CTNSO60931 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CTNSO60931 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CTNSO60931 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNSO60931 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNSO60931 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNSO60931 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
CTNSO60931 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.01■□□□□ 0.79
CTNSO60931 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNSO60931 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNSO60931 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.01■□□□□ 0.79
CTNSO60931 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.01■□□□□ 0.79
CTNSO60931 MIR5787-201ENST00000611784 55 ntBASIC20.01■□□□□ 0.79
CTNSO60931 AC026471.6-201ENST00000622954 1905 ntBASIC20.01■□□□□ 0.79
CTNSO60931 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CTNSO60931 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTNSO60931 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20■□□□□ 0.79
CTNSO60931 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CTNSO60931 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20■□□□□ 0.79
CTNSO60931 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CTNSO60931 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CTNSO60931 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20■□□□□ 0.79
CTNSO60931 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20■□□□□ 0.79
CTNSO60931 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20■□□□□ 0.79
CTNSO60931 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20■□□□□ 0.79
CTNSO60931 AC003102.1-202ENST00000563394 1796 ntBASIC20■□□□□ 0.79
CTNSO60931 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20■□□□□ 0.79
CTNSO60931 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20■□□□□ 0.79
CTNSO60931 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20■□□□□ 0.79
CTNSO60931 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTNSO60931 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CTNSO60931 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.99■□□□□ 0.79
CTNSO60931 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.99■□□□□ 0.79
CTNSO60931 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.99■□□□□ 0.79
CTNSO60931 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.99■□□□□ 0.79
CTNSO60931 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.99■□□□□ 0.79
CTNSO60931 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.99■□□□□ 0.79
CTNSO60931 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CTNSO60931 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTNSO60931 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTNSO60931 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTNSO60931 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CTNSO60931 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNSO60931 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTNSO60931 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTNSO60931 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms